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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00156 ATGGCTTCCTCCGGTGGCAATACGCCGTCGTCCGGTGGTTCGAATCTTCGAGAAGAAACCAATCAGAGAAAAATAAAAAGAATGTTATCCAACAGAGAATCAGCAAGGAGATCAAGACTGAGGAAGCAGAAGCACCTGAACGATCTCACAACTCAGCTGAGTCAACTCAGGAACGAGAATGACCGGGTCATGTATTGTATCAACATGATAACACAGCATTATATGAGTCTGGAGGCTGAGAACTTGGTGCTCGGAGCTCAGGTGACGGAGCTCGGCCACCGGCTCCGGTCGCTCAACGAGATCATTACTTGTTTGGAACAACCGATTGATGACGGAAGTTGGTTTCCCGGTGAGCAGTATAGCGGGCTCGGAGGTGGTAATGACTCAGTGAGTCATCTTTACGTGTGTCAACCCATACGGGCTTCTATTGACATGATTATGTAA 444 48.2 MASSGGNTPSSGGSNLREETNQRKIKRMLSNRESARRSRLRKQKHLNDLTTQLSQLRNENDRVMYCINMITQHYMSLEAENLVLGAQVTELGHRLRSLNEIITCLEQPIDDGSWFPGEQYSGLGGGNDSVSHLYVCQPIRASIDMIM 147
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00156 147 SUPERFAMILY Leucine zipper domain 23 78 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Mimi17g00156 147 Gene3D - 21 74 - -
Mimi17g00156 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 106 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Mimi17g00156 147 Pfam bZIP transcription factor 21 81 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mimi17g00156 147 MobiDBLite consensus disorder prediction 1 18 - -
Mimi17g00156 147 Coils Coil 39 59 - -
Mimi17g00156 147 SMART brlzneu 19 83 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mimi17g00156 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mimi17g00156 147 FunFam BZIP transcription factor 21 72 - -
Mimi17g00156 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mimi17g00156 147 CDD bZIP-plant-GBF1 24 75 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Mimi17g00156 147 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00156 K25786 bZIP transcription factor 1/2/11/44/53
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr17:4328415 Mimi18g02004 Mimi-Chr18:87792343 dispersed
Mimi Mimi-Chr11:32060584 Mimi17g00156 Mimi-Chr17:4328415 wgd
Mimi Mimi-Chr14:23014931 Mimi17g00156 Mimi-Chr17:4328415 wgd
Mimi Mimi-Chr17:4328415 Mimi17g00171 Mimi-Chr17:4704084 wgd
Mimi Mimi-Chr17:4328415 Mimi19g01688 Mimi-Chr19:75693539 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mimi19g00783 ACH 23 170 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 45.752 8.75e-34 115.0
Mimi19g00792 ACH 23 170 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 45.098 9.86e-34 115.0
Mimi19g01688 ACH 23 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 49.275 2.70e-42 137.0
Mimi18g01387 ACH 1 365 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 51.451 9.81e-98 291.0
Mimi18g01730 . 60 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 47.312 8.06e-19 77.4
Mimi18g01859 . 1 301 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 53.636 2.76e-103 304.0
Mimi18g01866 . 1 312 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 51.906 1.70e-103 304.0
Mimi18g02004 WGDA 24 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.049 2.58e-44 142.0
Mimi17g00104 . 22 368 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 46.094 1.77e-85 264.0
Mimi17g00109 . 1 396 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 39.055 1.95e-52 178.0
Mimi17g00156 . 19 163 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.649 1.00e-32 112.0
Mimi17g00171 ACH 35 124 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 58.889 8.74e-31 105.0
Mimi17g00480 ACH 1 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.918 1.12e-104 306.0
Mimi17g01009 . 80 268 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 46.445 5.59e-37 130.0
Mimi17g01071 . 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.333 2.55e-23 97.1
Mimi17g02385 . 18 102 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 62.353 4.29e-31 105.0
Mimi17g02463 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 25.248 9.24e-15 70.1
Mimi17g02493 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 25.248 2.03e-14 69.3
Mimi17g02752 WGDA 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.395 2.87e-104 312.0
Mimi16g00129 . 5 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 51.645 3.13e-84 253.0
Mimi16g00171 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 62.798 3.64e-144 411.0
Mimi16g00183 . 24 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 48.138 3.22e-167 496.0
Mimi16g02543 . 146 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 47.603 7.23e-123 380.0
Mimi16g02566 . 6 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 58.912 1.47e-127 368.0
Mimi15g00943 ACH 5 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 39.623 8.97e-26 95.5
Mimi15g01059 ACH 1 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 54.762 7.36e-49 154.0
Mimi15g02166 . 8 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 45.113 3.73e-114 346.0
Mimi15g02185 WGDA 1 253 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 53.759 2.61e-81 243.0
Mimi15g02426 . 1 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 59.375 8.42e-162 465.0
Mimi14g00621 . 1 404 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 57.353 3.37e-142 436.0
Mimi14g00653 WGDA 50 254 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 47.664 5.69e-53 174.0
Mimi14g01171 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.08 1.91e-44 142.0
Mimi14g01472 . 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.333 4.84e-23 96.7
Mimi14g01518 . 4 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 32.024 1.97e-26 106.0
Mimi13g00172 ACH,WGDA 1 453 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 59.006 0.0 537.0
Mimi13g00394 WGDA 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 66.165 1.67e-51 162.0
Mimi13g02126 WGDA 16 338 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 49.085 1.00e-79 244.0
Mimi12g00029 . 341 386 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 60.87 5.47e-11 57.0
Mimi12g01877 . 7 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 51.724 4.10e-113 335.0
Mimi12g01894 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 56.545 1.04e-120 350.0
Mimi12g02588 . 1 146 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G17770 36.81 3.39e-16 70.9
Mimi11g00164 ACH,WGDA 30 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 57.554 4.49e-46 148.0
Mimi11g00424 ACH 153 304 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G37730 36.538 2.14e-16 73.6
Mimi11g00550 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 52.464 2.16e-101 300.0
Mimi11g00788 ACH 21 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 49.492 9.41e-93 297.0
Mimi11g00945 WGDA 9 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 44.311 3.06e-41 134.0
Mimi10g00206 . 1 420 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 47.098 8.82e-99 301.0
Mimi10g00279 . 1 400 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 52.088 4.49e-113 343.0
Mimi10g00441 . 1 247 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 59.559 2.94e-106 306.0
Mimi10g01302 ACH,WGDA 21 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 54.14 2.97e-43 141.0
Mimi9g00177 . 12 144 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 57.778 2.70e-52 161.0
Mimi9g00307 WGDA 6 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 48.395 4.53e-104 310.0
Mimi9g00602 . 1 388 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 49.5 6.34e-119 350.0
Mimi9g01235 . 213 276 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.125 2.50e-15 67.0
Mimi8g00074 . 138 320 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 31.351 1.14e-16 75.5
Mimi8g00170 WGDA 15 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 48.368 1.87e-77 238.0
Mimi8g01046 WGDA 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 71.895 4.85e-60 182.0
Mimi8g01240 ACH,WGDA 120 453 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 63.584 1.33e-151 433.0
Mimi7g00022 . 26 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 57.911 5.33e-113 333.0
Mimi7g00263 . 121 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 28.033 1.03e-19 85.1
Mimi7g00740 . 24 128 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 35.238 6.48e-17 72.0
Mimi6g00014 . 155 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 57.812 1.29e-16 75.1
Mimi6g00222 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 70.588 2.82e-167 467.0
Mimi6g00750 WGDA 5 154 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 35.032 6.34e-20 79.7
Mimi6g00763 ACH,WGDA 101 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 38.938 1.40e-19 82.4
Mimi6g01686 . 213 295 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 45.783 1.52e-16 76.3
Mimi5g00501 ACH 5 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 50.758 1.22e-94 286.0
Mimi5g00779 . 12 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 44.97 4.42e-77 237.0
Mimi5g01015 . 6 271 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 48.986 3.81e-73 226.0
Mimi5g01038 . 6 271 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 47.351 8.35e-71 221.0
Mimi5g01103 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 56.982 1.18e-167 479.0
Mimi4g00821 WGDA 49 254 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 50.0 2.34e-51 169.0
Mimi4g01079 ACH 1 320 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 43.769 1.33e-68 213.0
Mimi4g01092 . 114 208 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 31.25 1.86e-10 57.8
Mimi3g01561 WGDA 46 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 54.918 2.22e-37 125.0
Mimi3g01743 . 122 156 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G17770 72.222 1.12e-08 48.5
Mimi3g02381 . 78 270 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 45.226 7.66e-40 136.0
Mimi2g00296 ACH,WGDA 15 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 50.968 2.79e-40 133.0
Mimi2g00481 . 87 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 56.41 6.85e-21 84.3
Mimi2g00871 . 1 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 49.848 3.86e-85 256.0
Mimi2g01064 . 118 324 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 26.05 3.85e-17 78.2
Mimi2g01104 . 1 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 57.067 4.23e-180 518.0
Mimi2g01217 . 1 305 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.783 6.67e-105 308.0
Mimi2g01254 . 1 305 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.783 6.67e-105 308.0
Mimi1g00307 . 114 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 34.677 1.64e-31 122.0
Mimi1g00315 . 114 467 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 34.146 4.70e-30 118.0
Mimi1g00876 . 21 289 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 68.07 1.32e-127 371.0
Mimi1g00949 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 67.56 9.62e-153 437.0
Mimi1g01877 . 16 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 50.641 3.85e-40 132.0
Mimi1g02041 WGDA 1 242 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 52.652 6.55e-81 242.0
Mimi1g02453 ACH,WGDA 22 209 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 32.461 2.11e-21 85.5
Mimi1g02483 WGDA 22 209 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 32.461 2.68e-21 85.1
Mimi1g03434 ACH 1 349 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.372 4.19e-111 326.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Mimi bZIP_1 1.2e-10 CL0018 TF bZIP