Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mimi17g00180	ATGGCTGCCATTTTAGCTCGCAAGTCGATCTCTGCTATTCGTAATCGACAGCTTGTTTTGGCAGGACAAATGTTGCAGGGTCCTCACAATGGGACAACTTCTGGTGCACGCTCGTTTGCAACCAAACATTCATTCTCAACTGATAAAGATGATGAGGAAAGAGAAAAGCTTGCAAAAGAGATCTCAAAAGATTGGAGTTCTGTCTTCGAGCGGAGCATAAACACATTATTTCTAACTGAACTGGTTCGAGGTCTGTCTCTGACACTCAAATACTTCTTTGAGCCCAAAGTTACTATTAATTATCCATTTGAGAAGGGTCCTTTGAGCCCTCGATTTCGAGGAGAACATGCCCTCAGACGATATCCAACCGGAGAAGAACGTTGTATTGCCTGTAAACTTTGTGAAGCTATATGCCCTGCTCAAGCTATCACCATAGAAGCAGAGGAACGTGAAGATGGCAGTCGTAGAACAACAAGGTATGACATTGATATGACAAAGTGTATATACTGTGGATTCTGCCAAGAAGCATGCCCTGTTGATGCAATTGTGGAAGGCCCCAACTTTGAGTTTGCTACCGAAACCCATGAGAGGCTGGAAAATACATCAGCAAATTTGGAAACCAGTGACCCTTTGTCTTTTCTGACCTCGACGGCCTCTGATGGTGGCGATAAGGGTCAGACGGGGTTTCGACAAAGGTCTAAACACCAAATTGATATTGAACAGCCAGTCCAACCAACATGTGCCATTTTGGCACCAGAAGACACACACCAAGGCCATACAGGGTCATTAGTATCAGCCGAAAGGGCCTGCCTAGCAGGCAACAAGCCACAAGTGCAGGCTATAGGGCCATATACTGTAGGCAGCAGGACCCTCCCTACACAGATCAACCTTAGCAGACCCAGCAGGGTACCAGGAAGAAAGCATAACATTCGTTGGCTTCCATTCCATAACGCAAACATATCATCGGAAAGTGAACGACGGTTATCGCCGGCGATGATACGAGCGGTGATCGTAATCAATGACCAAGGCAAGCCTCGTCTTGTCAAATTCTACGACTATCAGCCCTTGGAGAAACAGCAGGAAATCATTCGGAACATATATGGAGTTCTATGCAGGCGAGCTGAGAATGTGAGCAACTTTGTTCAAGATTCAACTTTTGGACTGGATACCCGACTTGTATACAAGACTTTCGCTACACTATACTTCATTGTCATATTTGATGATTCTGAAAATGAACTTGCTATACTAGATCTTATGCAAGTATTCGTGGAGACGTTGGACAAGTGTTTCAGTAACGTGTGTGAGCTTGATATCGTGTTCAATTTCAATAAGGTGCATACCATCCTTGATGAGATTATTTTAGGTGGTCAAGTTGTGGAAATGAGTTCCTCTGAAGTTGTTAAAGCACTAGACGACATGTCTCGGTTGGAGAAGAACCCAAATTCGACAGTCCGAGTTCCAAAATCCATATCTAGTTGGCCTGGACGATAA	1491	44.47	MAAILARKSISAIRNRQLVLAGQMLQGPHNGTTSGARSFATKHSFSTDKDDEEREKLAKEISKDWSSVFERSINTLFLTELVRGLSLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHERLENTSANLETSDPLSFLTSTASDGGDKGQTGFRQRSKHQIDIEQPVQPTCAILAPEDTHQGHTGSLVSAERACLAGNKPQVQAIGPYTVGSRTLPTQINLSRPSRVPGRKHNIRWLPFHNANISSESERRLSPAMIRAVIVINDQGKPRLVKFYDYQPLEKQQEIIRNIYGVLCRRAENVSNFVQDSTFGLDTRLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDIVFNFNKVHTILDEIILGGQVVEMSSSEVVKALDDMSRLEKNPNSTVRVPKSISSWPGR	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mimi17g00180	496	ProSitePatterns	Clathrin adaptor complexes small chain signature.	392	402	IPR000804	GO:0006886(InterPro)\|GO:0016192(InterPro)\|GO:0030117(InterPro)
	Mimi17g00180	496	Pfam	4Fe-4S dicluster domain	127	181	IPR017896	-
	Mimi17g00180	496	FunFam	NADH-quinone oxidoreductase subunit I 1	101	210	-	-
	Mimi17g00180	496	SUPERFAMILY	SNARE-like	332	473	IPR011012	-
	Mimi17g00180	496	CDD	AP3-sigma	332	475	IPR027155	GO:0006896(InterPro)\|GO:0030123(InterPro)
	Mimi17g00180	496	Pfam	Clathrin adaptor complex small chain	332	475	IPR022775	-
	Mimi17g00180	496	SUPERFAMILY	4Fe-4S ferredoxins	101	200	-	-
	Mimi17g00180	496	PANTHER	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL	60	205	IPR010226	GO:0003954(PANTHER)\|GO:0005747(PANTHER)\|GO:0006120(PANTHER)\|GO:0009060(PANTHER)\|GO:0016020(InterPro)\|GO:0016651(InterPro)\|GO:0032981(PANTHER)\|GO:0045272(PANTHER)\|GO:0051539(InterPro)
	Mimi17g00180	496	MobiDBLite	consensus disorder prediction	216	235	-	-
	Mimi17g00180	496	ProSiteProfiles	4Fe-4S ferredoxin-type iron-sulfur binding domain profile.	119	148	IPR017896	-
	Mimi17g00180	496	NCBIfam	NADH-quinone oxidoreductase, chain I	84	200	IPR010226	GO:0016020(InterPro)\|GO:0016651(InterPro)\|GO:0051539(InterPro)
	Mimi17g00180	496	ProSitePatterns	4Fe-4S ferredoxin-type iron-sulfur binding region signature.	167	178	IPR017900	-
	Mimi17g00180	496	Hamap	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI].	75	209	IPR010226	GO:0016020(InterPro)\|GO:0016651(InterPro)\|GO:0051539(InterPro)
	Mimi17g00180	496	Gene3D	-	332	490	-	-
	Mimi17g00180	496	Gene3D	-	101	239	-	-
	Mimi17g00180	496	ProSiteProfiles	4Fe-4S ferredoxin-type iron-sulfur binding domain profile.	158	187	IPR017896	-
	Mimi17g00180	496	FunFam	AP complex subunit sigma	332	486	-	-
	Mimi17g00180	496	MobiDBLite	consensus disorder prediction	29	51	-	-
	Mimi17g00180	496	ProSitePatterns	4Fe-4S ferredoxin-type iron-sulfur binding region signature.	128	139	IPR017900	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mimi17g00180	K12399	AP-3 complex subunit sigma
	Mimi17g00180	K00338	NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Mimi	Mimi-Chr17:4988806	Mimi4g01907	Mimi-Chr4:63469914	dispersed
	Mimi	Mimi-Chr15:63630122	Mimi17g00180	Mimi-Chr17:4988806	transposed
	Mimi	Mimi-Chr14:23260588	Mimi17g00180	Mimi-Chr17:4988806	wgd