AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00187 ATGGCTTTAGCTTCTTCCTCTATTTGCAGGTTCATCTTCTATGCTCTATTGCTTATGCAACTTTGCGGTGCTCGTGAGATCGTGGACAAATTAAACCAAAAAGATGATTACAACAAAGAAAATCATATAAATTTATACAAAAAGAATGATCTTTCCGATTTGGATCCGGCTCTAAATGTGTTCTTTCATGTAAATGATTTATATTCGGGCAAAAAAATGCCAGTTTATTTTGCGGTTAATGATCCATCAACAACTCCTCGGTTGTTAACAAAAGAACAAGCCGATTCAATACCATTTTCCTTAGAAAAACTCGCATATCTTCTAAAGTTTATATCATTACATGAGGGTTCACCACAGGCTCGAGCCATGGAACAAACCCTCAAACAGTGCGAGCTAGACGCAACACCTGGTGAGACTAGGTTTTGTGCCAGCTCGTTAGAGTCCATGCTGGACTCTACACGCGGGATATTAGGTATGGCTAACCTAAAGGCGTTGACTACCAATATCCACAACTTGTCAAATACCCTTTTGCAAGGGTACACTTTTTTAAAGGAGCCATTGGAGATTAATATTTCTGATATGGTGGCATGTCACACCATGGCTTACCCATATGCGGTTTATTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATATAGTAGATGCTATTGCTGTCTGCCACATGGACACTTCCATGTGGGATAGTGATCACGTGGCGTTTCGTGTGCTCGGAGGCCAGCCTGGCAGTTCGCCGGTGTGTCATTTTCTTCCGGCCGATAACATCGTGTGGATAGTACCATCACCATAG 840 41.43 MALASSSICRFIFYALLLMQLCGAREIVDKLNQKDDYNKENHINLYKKNDLSDLDPALNVFFHVNDLYSGKKMPVYFAVNDPSTTPRLLTKEQADSIPFSLEKLAYLLKFISLHEGSPQARAMEQTLKQCELDATPGETRFCASSLESMLDSTRGILGMANLKALTTNIHNLSNTLLQGYTFLKEPLEINISDMVACHTMAYPYAVYYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTSMWDSDHVAFRVLGGQPGSSPVCHFLPADNIVWIVPSP 279
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00187 279 SMART BURP-2 59 277 IPR004873 -
Mimi17g00187 279 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 41 277 IPR044816 -
Mimi17g00187 279 ProSiteProfiles BURP domain profile. 61 277 IPR004873 -
Mimi17g00187 279 Pfam BURP domain 60 275 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00187 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr14:23766934 Mimi17g00187 Mimi-Chr17:5229721 dispersed
Mimi Mimi-Chr17:5229721 Mimi9g01578 Mimi-Chr9:59137304 dispersed
Mimi Mimi-Chr17:5114123 Mimi17g00187 Mimi-Chr17:5229721 proximal