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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00207 ATGGAAGCCGCGAAGAAACAAAACCGTGCAGCAGAGGAAAACAAGAACAAAGGTGCAGATGAGGTTAAGCTTCTAAATGATGAATTATCAAAATTGAAAACACAAATTGTAAAACTGGAATCTGAACATGAAGCAAAAGAAAAAGAGATCAAATCTGCTGAAGCAAATTCACTCGCTCTTAAGAACCAATCGGAAGGCTTTCTTCTCGAGTATGATCGTTTGCTAGCAGAAAACCAAGATCTCAGAGATCAATTGCGTGCCATTGATGAAAGTGCGTCTCATTCTAGTGGAAAGAAGAATATGGTTTTATCTCAGAATAGAACACTGCTATGCATCCCATCCCTTGCTTGTACGTGTAAAGATGGTCGACTGAGTGAAGTTCGAACTACGGTGGCTGCCAAAGGGTTGATGGCATGGCCATTGGCCGAATGTTTAGTTCCGAATGGAGATCGAATGGATGACAGTGGCGAATAG 474 41.77 MEAAKKQNRAAEENKNKGADEVKLLNDELSKLKTQIVKLESEHEAKEKEIKSAEANSLALKNQSEGFLLEYDRLLAENQDLRDQLRAIDESASHSSGKKNMVLSQNRTLLCIPSLACTCKDGRLSEVRTTVAAKGLMAWPLAECLVPNGDRMDDSGE 157
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00207 157 Coils Coil 71 91 - -
Mimi17g00207 157 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 82 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Mimi17g00207 157 Gene3D - 18 81 - -
Mimi17g00207 157 FunFam B-cell receptor-associated protein 29 18 81 - -
Mimi17g00207 157 MobiDBLite consensus disorder prediction 1 22 - -
Mimi17g00207 157 Coils Coil 1 63 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00207 K14009 B-cell receptor-associated protein 31
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr17:5527291 Mimi3g00107 Mimi-Chr3:2302701 dispersed