AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00218 ATGCACGTGCCCCCAATTCATCCCTACATTTTGTCCGATTCTGTCTGCAAAATCGATATCTCAGGCCACCGTAACGCCGCCGCACCGTCGCACCGTCGGCTTCAATCGGCGTCTAGTGCTACTGATTTTGGTTTTGATGGAATCCGGATTGAAAGTTATCGCTCGAAGATTGCTTTCCTTTTCCTTGTTCGTGACAATCTTCCTCTTGATTTCCTATGGCACAACTTCTTTAAGAATGCAGATCCAGAGAAATTTACAATTTACATACACTCGAAGCCTGGTTTTGTGTTTGATGCGTCATCTACCAGATCAGTATTTTTCTACAACCGACAGTTGGAAAATAGTGTTGAGGTGGGTTGGGGCAAGCCAACTATGATTGAAGCAGAAAAGCTGTTGTTCAAGGCAGCCCTTGATGATCCACACAATCATATATTTGTTCTTCTCTCTGACAGTTGTGTCCCGCTATATAATTTCAGTTACATATATGCATATCTAATGTCCTCTCCAAGAAGTTTTGTGGACAGCTTTGTTGATGCCAATGAAAAGCGTTATAATCCAGAGATGTCTCCTGACATACCTGAAGACAAATGGCGGAAAGGATCCCAGTGGATCACATTGGTAAAAAGCCATGCAGAGGTGGTTGCATACGATCATGTTGTTTTCCCAATATTTAACAAACACTGCAAGCGGCGACCACTTCTAGACTTGAGCAAGGGAAACGAGTCTCTTAAAGAGCAGCAGCAACACAATTGCATTCCGGATGAACATTATGTGCCCACCTTACTTGCAATGCGGGGATTTGAGGATGAGTTGGTTAGAAGAACATTGACTTATTCTCTATGGAACCAGTCTACTGAAACGATGAATACGCAAGCCTGGCACCCTGTAACATTTGTTTATGCAAGTGCTAGCCAGAAAAACATTCAAGATATTAAGGATATTGACCATGTTTATTTCAAGTCTGAGAACCGAACTGAATGGTGCAGTCAAGATGCTAGATCTAGCAGCGGGCCATGCTACTTATTTGCAAGGAAGTTCACTCGTGGTGCCGCCATGCGCCTGTTGACCAACGGTGTGGTTGGTCCATATGATCCCAACACATTGTTTTTGGACCGGATATAG 1122 43.67 MHVPPIHPYILSDSVCKIDISGHRNAAAPSHRRLQSASSATDFGFDGIRIESYRSKIAFLFLVRDNLPLDFLWHNFFKNADPEKFTIYIHSKPGFVFDASSTRSVFFYNRQLENSVEVGWGKPTMIEAEKLLFKAALDDPHNHIFVLLSDSCVPLYNFSYIYAYLMSSPRSFVDSFVDANEKRYNPEMSPDIPEDKWRKGSQWITLVKSHAEVVAYDHVVFPIFNKHCKRRPLLDLSKGNESLKEQQQHNCIPDEHYVPTLLAMRGFEDELVRRTLTYSLWNQSTETMNTQAWHPVTFVYASASQKNIQDIKDIDHVYFKSENRTEWCSQDARSSSGPCYLFARKFTRGAAMRLLTNGVVGPYDPNTLFLDRI 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00218 373 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 52 355 IPR044174 GO:0016757(InterPro)
Mimi17g00218 373 Pfam Core-2-I-Branching enzyme 57 311 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00218 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr17:5874135 Mimi17g03052 Mimi-Chr17:94525312 dispersed
Mimi Mimi-Chr17:5874135 Mimi4g01590 Mimi-Chr4:50764547 transposed