AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00234 ATGTTCACGCACTCCACAGTCCAGTATCCACCCGTCGCCACAGCCCCCATTTTATTTGGGAACCCTAAACTCCTAAAGCCATCCGATCGACTTTCTCCGTCGTCTCCTCCGATCGACTTTCTCCGCTCTCCTCCGCGGCTCCGACAATCGTATCCTTCTCCCGCGTCTCCTCCGCCATCATTTACCGACGTTCCAGAATCTGTCGTTTCCTTTGCTGCCGCGTCTCCTCCACCGTCGATCGAGAATCCGCCTTCCTCATCACTAACTCTCTACCAAAACCACCGGCGCATATTAGCAGCACCACCGTCGGGAACCAATTGTGTTCGTATCGAAATGGATGTGCTATTCAATTCAATCGACGTTCGTGATCTGCTATCGTCACACGATCTCGACGACTCATCTCCGCTCGCAGCCCCCGATCTCCGCCTCCTCATCGATCGGCTTCAAGTCCGATCAATTGACATCAAGTCCAAAGTACACAACTACATACTCTCTCACAACAACGAGTTCTCTGACCTGTTCTCCCGCTGCTCCGACGTCGTCGTAAACTCTGAGCAACTCTATGATCAAGTATCCAACCTCGTGAATCTGTTATCCTCGGATCAGAAACCGATCGATGTCAAGACTAAGGAAACAGTTGAAGAGATTAGATCGAAACGTGTTCAATTGAAGGAGAAGAAGGACGTGTTGGATTTAGTGAAGGTAGTGGTGAACTTGAGTAAAGTTTTGAGTGTCGTGGAGGATAATTTGAAAGCCGGGGAGATTGTTAGGGCAGCGGAGGTGCTTACGGAGTTAAAGGTGGCCTTACGAGTGACTGAGGATCGATCGGAGGAAAGTGAGCCGGTTGTTTATGGTTTGTTACAACAGAAATGGACAAAATGCTTCGAAGAGATACAACATTTACTAGTCAAGTTCATTGGGAATGCAGTGATATTTGATCAACAGTCCAACGCTGTTTATGTCAAGAACACAATGCATATCAATGATATTCAAGGGATTGAGCTTTCAACTGTTTTTAAAGCAATGCAAGTGATTGGTGTTTTAGATTACGGGCTTGCAAAAGTAGCAGATTTGATGACTAGATATGTAATAACTCCTGCAGTGGGATCTATTTCTCACAGTTTTTCTGTGGAAGAACAAAGATCAGATTCAGGAGATGTAACCGAGGCAGTTTTGAGAATAACCCCCCTTTCTGGTACTCAGGTTGAGAACATGGATGCTGAAACTATATATTCTGGAATTAATGTGGTCATTAAGTTTATTTATAACTATATTTGCTTTCAAAATTCTTCTTGGATGCAATTATTTGGAAGATTGACATGGCCCCACATGTCTGAATTGATTATTACAAACTTCCTTTCCAAGAATGTTCCTGACGATGCTTCCAAACTTTCTGATTTCCAAACGATAAGACAACTCACATCTGAGTTTGAAACATCTCTTAAAGAAGTTATGTTCATATCCTCTAGCAAAGATGAAAGGCTGACCAATTTTACTGATAATGTTGAAGTTCACTTTGCAACAAGGAAGAAGACTGAGATCTTAGCAACAGCTAGGGACCTTCTCCTACATTCAGACTTTAAACTTCCTAAGGATTATTCAAGAATAAGTGAAGGCATTAAAAATGGTGGGAACGTAGAATTGCTTTTCTCATCTGAGAGGTGTGCCATATCCGAAGCTGCTTCTCAACTACTGGAACTTGTGCATCAAACACTCCAGGATGTTTGTTTGTCATCCCCAACAGTTGCCTTAGAATTCTGCCGTGCTGCTAGGGATGCTCTACTTCTATATGAAGCTGTTATTCCGGTTAAGCTAGAAAGACAGCTGGATGGCATCAACCAGGTTGCTGTTCTAATTCATAATGATTGCCTCTTTCTATCACAAGAGATTCTAGGCCTTAAATTTGAGTATCAGTCATATTTCCCGACTTCCATGAAGGGAGCTGTGTTTATTGATTTAGGTATAAGATACAAGCTAATGGCAGAAGAGATATTACAAAGACAAATACAGCTTGTTAAGCATAATTTAATGGAGGCCATTGATGGTGCAGATGGATTTCAAAATACCCATCAACCAAAACGATATGAATCTGCAAGCATCAGTATCGATCAGGTGGCTTTTATTCTTGAGAAAGTGCATATAATTTGGGAGCCATTATTGCTACCCTTTACATACAAAAGAAGTATGTGCACTGTTTTGGAGGCTGTGTGTTCTAGGATGACTAAAGACATTCTTCTTTTAGATGATATAGCAGCAGAAGAAACATTACAGATTCAAAGGTTAATTCATATGTTGCTGGAAAACTTTTCATCTTTATTGGAGTCTTTGGTTGATAAGAATAAAGCAACAAAACCACAGAAAGTATCATCATCCTCAATTGATGATTTAATTCCATCACTTACTCGGTTACGGTTACTGGCAGATATGCTGGACATGCCTCTTAAATCTATAACTGCGTCTTGGGAAAGCGGTGAGCTGCTCAAGTGCGGTTATACTGCATCCGAGGTATTATTATTTCTTTGA 2523 41.82 MFTHSTVQYPPVATAPILFGNPKLLKPSDRLSPSSPPIDFLRSPPRLRQSYPSPASPPPSFTDVPESVVSFAAASPPPSIENPPSSSLTLYQNHRRILAAPPSGTNCVRIEMDVLFNSIDVRDLLSSHDLDDSSPLAAPDLRLLIDRLQVRSIDIKSKVHNYILSHNNEFSDLFSRCSDVVVNSEQLYDQVSNLVNLLSSDQKPIDVKTKETVEEIRSKRVQLKEKKDVLDLVKVVVNLSKVLSVVEDNLKAGEIVRAAEVLTELKVALRVTEDRSEESEPVVYGLLQQKWTKCFEEIQHLLVKFIGNAVIFDQQSNAVYVKNTMHINDIQGIELSTVFKAMQVIGVLDYGLAKVADLMTRYVITPAVGSISHSFSVEEQRSDSGDVTEAVLRITPLSGTQVENMDAETIYSGINVVIKFIYNYICFQNSSWMQLFGRLTWPHMSELIITNFLSKNVPDDASKLSDFQTIRQLTSEFETSLKEVMFISSSKDERLTNFTDNVEVHFATRKKTEILATARDLLLHSDFKLPKDYSRISEGIKNGGNVELLFSSERCAISEAASQLLELVHQTLQDVCLSSPTVALEFCRAARDALLLYEAVIPVKLERQLDGINQVAVLIHNDCLFLSQEILGLKFEYQSYFPTSMKGAVFIDLGIRYKLMAEEILQRQIQLVKHNLMEAIDGADGFQNTHQPKRYESASISIDQVAFILEKVHIIWEPLLLPFTYKRSMCTVLEAVCSRMTKDILLLDDIAAEETLQIQRLIHMLLENFSSLLESLVDKNKATKPQKVSSSSIDDLIPSLTRLRLLADMLDMPLKSITASWESGELLKCGYTASEVLLFL 840
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00234 840 Gene3D - 655 839 IPR046362 -
Mimi17g00234 840 PANTHER CENTROMERE-KINETOCHORE PROTEIN ZW10 115 836 - GO:0006888(PANTHER)|GO:0007094(PANTHER)|GO:1990423(PANTHER)
Mimi17g00234 840 Pfam Centromere-kinetochore protein zw10, C-terminal 550 678 IPR048343 -
Mimi17g00234 840 Pfam Centromere-kinetochore Zw10 N-terminal 148 240 IPR009361 GO:0000278(InterPro)|GO:0000775(InterPro)|GO:0005634(InterPro)
Mimi17g00234 840 Pfam ZW10 C-terminal helical domain 701 837 - -
Mimi17g00234 840 Pfam Centromere-kinetochore protein zw10, middle domain 287 522 IPR048344 -
Mimi17g00234 840 MobiDBLite consensus disorder prediction 25 63 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00234 K11578 protein transport protein DSL1/ZW10