AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00253 ATGATTACACTTCAAACCCCAACAAAAACCCATGAAATTTCTACAAAATCCCTAAAAAATTCTGGGTTTTTATCGGCAATTGGGAACGCAATTGAAGAACAAGAGTATCGGAAAGCTAGGGCTGAAGTTATTCGTAAAGGAACAGGATTAGAGGGTTATAATATCGAGGGTATTTCGATTGGTGGTCATGAAACTTGTGTTATTATTCCTGAATTCAAGTGTGCGTTTGATATCGGAAGGTGTCCACCCAGAGCTGTTGGGATGAATTTCTTATTTATTACTCATGCTCATCTTGATCACATTGGTGGGCTACCGATGTATATTGCGACTCGTAGTTTGTACAACATGAGTCCTCCAACAGTATTTGTACCTCCTTCTATTAAACAAGATGTTGAAAATTTGATAGAGCTTCACAGGAAGATGGGTGATGTGGAACTAAATCTTGATCTGGTTGCATTGGATATAGGAGAAACATATGAGCTAAGAAACGATCTTGTAGTACGCCCATTTAAAACTCATCATGTAATACCAAGTCAGGGTTATGTGATTTACTCGGTTCGCAAGAAACTGAAGAAGCAATACCTTCACTTAAAAGGAAGGGAGATTGAGAAAAAGAAGAAATCTGGTGTTGAGATAACAGACATCATATTGTCCCCGGAGGTGGCATTCACCGGTGATACTAATTCTGATTTTCTGCTTGACCCGCGAAGCTCTGATGCATTGAGAGCCAAAGTTCTTATAACTGAGGCTACGTTTTTGGATGAGAAATGTGACGTTGAACATGCACGAGAACATGGTCACATGCATATTGATGAGGAAATCCGTCAAGCTGTAACGAAGTTGCAGGCAAAGGTTCCAGCCAAAGTGGTTCCTCTTACAGAAGGTTGCAAACAGAAGTGCAGCTTGTTTTCCAATCCTGAGGCATTTGATAAGGCTGCTCTGGTTTGCATTGGATTTGACTTCACTCAGGTCAACTGTTCACCATGTTGA 990 40.51 MITLQTPTKTHEISTKSLKNSGFLSAIGNAIEEQEYRKARAEVIRKGTGLEGYNIEGISIGGHETCVIIPEFKCAFDIGRCPPRAVGMNFLFITHAHLDHIGGLPMYIATRSLYNMSPPTVFVPPSIKQDVENLIELHRKMGDVELNLDLVALDIGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYLHLKGREIEKKKKSGVEITDIILSPEVAFTGDTNSDFLLDPRSSDALRAKVLITEATFLDEKCDVEHAREHGHMHIDEEIRQAVTKLQAKVPAKVVPLTEGCKQKCSLFSNPEAFDKAALVCIGFDFTQVNCSPC 329
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00253 329 SUPERFAMILY Metallo-hydrolase-oxidoreductase 88 277 IPR036866 -
Mimi17g00253 329 PANTHER TRNASE Z TRZ1 10 283 - -
Mimi17g00253 329 Pfam Beta-lactamase superfamily domain 87 284 IPR001279 -
Mimi17g00253 329 Gene3D - 53 290 IPR036866 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00253 K00784 ribonuclease Z [EC:3.1.26.11]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr11:34845399 Mimi17g00253 Mimi-Chr17:7137476 dispersed