AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00255 | ATGGGTATCACCGGAGAACTCGTGCGGAACGCGTTCTCAAAGCATCGATCTTTCGGAACGACACATGACACCAATGTGATGAGAAACCATGCAGTTGAAAGAAAGAGATGGGCTTCGGTTAGATCATATCTTTGTGGTGATGAATTTAGTTCAGTTTTAGCTGAAGAAGATTTTGAATCTAGAAGAAGTTCAAAAGCATCTGTGAATTCTGTTTTGATTGATCAAGATTATCCTAACTCTGCTACAACATCAAAAGCTACTGTTTTTAGTTCAAGAATCGATGACGATTCGACATCTGTCAAGGGTTCCGAGGCCACGGTCACAAAACCTGTTTCTGATCAAAACTCGAGTGAGACACTCGAGTTCGATGATCAGAACAAACTGGCCTCTGAAAACGAAGCTGCAATAGTCATTCAACTAGCATTTAGAAAATTTTTGGCGAGACGTCAAACTGAAACTGAAAGACTTGAACAAGTGGATACGGGCGATCGGGCTCTAGAGTCGATAGCAACATCAATAGAAGTGCAAACTGGAAACTCAGTGATGGAGGTTAAGGATGGTAGTGAAAGTTTCACCCATCGTATGCAGCATCACAAGGGAGCCAGAGTACAAACATCAAAGCTAAAGCCTAAAGATTGGGATGATAGTACCGTGAGTAGCAACATAACAAAAATGAGGATTCAAAATAGACTAGAGGCATCTACAAGACGCGAAAGGGCACTCGCCTATGCTTTCTCACAACAGCTAAGAGTCTGCTCAAAGAAGAAACAAAGCGTGAGATCGGGGAACGAAACAGAAGCAAACATGAGTTGGAGTTGGCTCGAGAGATGGATGGCGACTCGACAACATGATACTTCTTTCGGGGATATAAGCAAACGGTTTGAGCAGTTAAACGGTAATCAAAAACTGATGGTAAAACGGAGAGTGATATCAAATTTAGCAGGCGAAGAGAAGGAAAGTTGCGGATCGAATGAAGTTTCTGTGCATTTCGATAACGTTTCTTTGAGCTCGAAAACGACTGATAAACCTTACTCTAAGCCCCGGAATAGGGTCAAGGCTACAAGTGCTTTGAGGCGAAAAAAGTTGCCGCGTTACGGTACCACTAAGGAGTATTGCAAGGTGAACAAGCAAGAAGAAAAATAA | 1143 | 42.43 | MGITGELVRNAFSKHRSFGTTHDTNVMRNHAVERKRWASVRSYLCGDEFSSVLAEEDFESRRSSKASVNSVLIDQDYPNSATTSKATVFSSRIDDDSTSVKGSEATVTKPVSDQNSSETLEFDDQNKLASENEAAIVIQLAFRKFLARRQTETERLEQVDTGDRALESIATSIEVQTGNSVMEVKDGSESFTHRMQHHKGARVQTSKLKPKDWDDSTVSSNITKMRIQNRLEASTRRERALAYAFSQQLRVCSKKKQSVRSGNETEANMSWSWLERWMATRQHDTSFGDISKRFEQLNGNQKLMVKRRVISNLAGEEKESCGSNEVSVHFDNVSLSSKTTDKPYSKPRNRVKATSALRRKKLPRYGTTKEYCKVNKQEEK | 380 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00255 | 380 | MobiDBLite | consensus disorder prediction | 93 | 119 | - | - | |
| Mimi17g00255 | 380 | MobiDBLite | consensus disorder prediction | 336 | 360 | - | - | |
| Mimi17g00255 | 380 | ProSiteProfiles | IQ motif profile. | 131 | 160 | - | - | |
| Mimi17g00255 | 380 | PANTHER | IQ-DOMAIN 5-RELATED | 64 | 337 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00255 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:7161739 | Mimi18g01012 | Mimi-Chr18:22818010 | dispersed | |
| Mimi | Mimi-Chr17:7161739 | Mimi6g01793 | Mimi-Chr6:65082606 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Mimi19g00062 | . | 1 | 243 | IQD Protein family | AT5G03040 | 40.068 | 5.78e-51 | 175.0 | |
| Mimi19g00063 | . | 246 | 409 | IQD Protein family | AT5G03040 | 37.209 | 6.92e-18 | 79.0 | |
| Mimi19g00082 | . | 246 | 379 | IQD Protein family | AT5G03040 | 38.806 | 3.33e-17 | 77.0 | |
| Mimi19g00083 | . | 1 | 243 | IQD Protein family | AT5G03040 | 40.411 | 2.50e-53 | 178.0 | |
| Mimi19g00654 | . | 1 | 788 | IQD Protein family | AT1G19870 | 33.139 | 7.43e-86 | 286.0 | |
| Mimi19g01132 | . | 1 | 332 | IQD Protein family | AT3G16490 | 40.793 | 5.18e-39 | 140.0 | |
| Mimi18g00653 | . | 230 | 794 | IQD Protein family | AT1G19870 | 33.284 | 3.34e-75 | 255.0 | |
| Mimi18g01012 | ACH | 1 | 379 | IQD Protein family | AT5G03040 | 42.043 | 7.80e-79 | 252.0 | |
| Mimi18g01615 | . | 21 | 352 | IQD Protein family | AT5G62070 | 43.236 | 4.79e-40 | 144.0 | |
| Mimi17g00255 | . | 1 | 401 | IQD Protein family | AT5G35670 | 40.385 | 9.94e-72 | 229.0 | |
| Mimi17g00472 | ACH | 1 | 241 | IQD Protein family | AT3G15050 | 49.206 | 1.49e-75 | 231.0 | |
| Mimi17g01511 | . | 1 | 374 | IQD Protein family | AT4G14750 | 46.482 | 3.00e-87 | 267.0 | |
| Mimi16g00911 | WGDA | 49 | 517 | IQD Protein family | AT3G59690 | 49.509 | 2.82e-139 | 409.0 | |
| Mimi16g01430 | . | 1 | 448 | IQD Protein family | AT5G03040 | 47.903 | 4.57e-114 | 356.0 | |
| Mimi16g01693 | . | 1 | 444 | IQD Protein family | AT3G49260 | 48.352 | 1.58e-99 | 304.0 | |
| Mimi16g01759 | . | 1 | 444 | IQD Protein family | AT3G49260 | 48.352 | 1.42e-99 | 304.0 | |
| Mimi15g01482 | WGDA | 11 | 533 | IQD Protein family | AT4G00820 | 42.676 | 2.05e-106 | 326.0 | |
| Mimi14g00426 | ACH,WGDA | 1 | 480 | IQD Protein family | AT4G23060 | 37.374 | 3.81e-52 | 179.0 | |
| Mimi14g01039 | ACH | 50 | 225 | IQD Protein family | AT3G15050 | 48.864 | 3.21e-47 | 168.0 | |
| Mimi14g02191 | . | 1 | 365 | IQD Protein family | AT4G14750 | 38.587 | 2.14e-50 | 171.0 | |
| Mimi13g00575 | ACH | 163 | 481 | IQD Protein family | AT4G23060 | 42.059 | 1.50e-58 | 197.0 | |
| Mimi13g00740 | . | 1 | 413 | IQD Protein family | AT2G26180 | 57.718 | 1.25e-143 | 415.0 | |
| Mimi11g01442 | ACH | 90 | 353 | IQD Protein family | AT3G16490 | 48.311 | 1.24e-71 | 224.0 | |
| Mimi11g01444 | . | 1 | 353 | IQD Protein family | AT3G16490 | 53.708 | 4.47e-99 | 298.0 | |
| Mimi11g01495 | . | 1 | 402 | IQD Protein family | AT1G72670 | 41.855 | 7.95e-84 | 260.0 | |
| Mimi10g00754 | . | 1 | 178 | IQD Protein family | AT3G15050 | 44.33 | 2.62e-41 | 144.0 | |
| Mimi10g01131 | . | 1 | 435 | IQD Protein family | AT5G13460 | 45.372 | 2.44e-97 | 296.0 | |
| Mimi9g00110 | WGDA | 48 | 534 | IQD Protein family | AT4G00820 | 40.661 | 1.68e-91 | 288.0 | |
| Mimi9g00664 | . | 1 | 353 | IQD Protein family | AT3G16490 | 45.676 | 1.19e-57 | 192.0 | |
| Mimi9g00761 | . | 40 | 288 | IQD Protein family | AT4G14750 | 27.574 | 2.04e-14 | 74.3 | |
| Mimi8g01196 | . | 1 | 458 | IQD Protein family | AT5G03040 | 42.5 | 9.11e-95 | 290.0 | |
| Mimi8g01215 | . | 106 | 239 | IQD Protein family | AT3G16490 | 44.776 | 1.80e-23 | 91.7 | |
| Mimi7g01326 | WGDA | 1 | 517 | IQD Protein family | AT3G59690 | 47.541 | 6.26e-143 | 419.0 | |
| Mimi7g01340 | . | 1 | 517 | IQD Protein family | AT3G59690 | 47.359 | 6.29e-145 | 424.0 | |
| Mimi6g00911 | ACH,WGDA | 98 | 576 | IQD Protein family | AT1G74690 | 37.959 | 3.66e-63 | 217.0 | |
| Mimi6g01596 | . | 1 | 455 | IQD Protein family | AT5G03040 | 53.503 | 1.05e-142 | 414.0 | |
| Mimi6g01615 | . | 1 | 455 | IQD Protein family | AT5G03040 | 52.665 | 2.35e-142 | 413.0 | |
| Mimi6g01793 | ACH,WGDA | 1 | 413 | IQD Protein family | AT3G52290 | 48.539 | 2.38e-94 | 288.0 | |
| Mimi4g00022 | . | 1 | 377 | IQD Protein family | AT3G22190 | 55.065 | 4.97e-110 | 328.0 | |
| Mimi4g00392 | . | 1 | 377 | IQD Protein family | AT3G22190 | 55.208 | 5.21e-109 | 326.0 | |
| Mimi4g00551 | ACH,WGDA | 108 | 342 | IQD Protein family | AT5G07240 | 39.163 | 2.52e-32 | 123.0 | |
| Mimi4g00578 | . | 1 | 480 | IQD Protein family | AT4G23060 | 30.629 | 4.40e-34 | 130.0 | |
| Mimi3g00069 | . | 69 | 244 | IQD Protein family | AT3G15050 | 49.721 | 3.93e-61 | 191.0 | |
| Mimi3g00140 | ACH | 69 | 244 | IQD Protein family | AT3G15050 | 49.721 | 3.93e-61 | 191.0 | |
| Mimi3g00252 | . | 1 | 353 | IQD Protein family | AT3G16490 | 48.655 | 1.05e-77 | 244.0 | |
| Mimi3g00327 | ACH | 42 | 353 | IQD Protein family | AT3G16490 | 52.161 | 2.51e-68 | 219.0 | |
| Mimi1g00652 | . | 200 | 793 | IQD Protein family | AT1G19870 | 34.646 | 4.50e-76 | 257.0 | |
| Mimi1g00659 | . | 200 | 793 | IQD Protein family | AT1G19870 | 34.24 | 8.36e-75 | 254.0 | |
| Mimi1g01787 | ACH | 103 | 585 | IQD Protein family | AT1G74690 | 37.298 | 1.43e-62 | 214.0 | |
| Mimi1g02146 | . | 11 | 534 | IQD Protein family | AT4G00820 | 53.902 | 1.59e-152 | 444.0 | |
| Mimi1g02644 | WGDA | 1 | 576 | IQD Protein family | AT1G74690 | 36.379 | 1.52e-75 | 249.0 | |
| Mimi1g03179 | ACH,WGDA | 1 | 420 | IQD Protein family | AT3G52290 | 46.813 | 1.59e-83 | 260.0 | |
| Mimi1g03578 | . | 82 | 331 | IQD Protein family | AT5G07240 | 43.359 | 1.24e-46 | 160.0 |