Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00290 | ATGGGTAAAATCTTGAGCCTGTTGCTTTGCTTTCTGATTTCGAATCTGGCCGTATCATCTGCTCAAACTTGCGGCAATTACGCCTTTTCGAGCAACGAAATCTACTCCACATGCGTATCGTTACCTGTTTTGGACTCGCATCTGCACTGGACTTACCATCCCTCCAACGGCTCCGTCGATCTGGCTTTCCGGCATACCGGATCGGCAACGTCACAGTGGGTTGCTTGGGCGCTCAACGTCGGTGGCCGTGGTATGGTCGGAGCGCAGGCTCTTGTTGCTGTAACCAGTTCAAACGGGTCGGTTCAAGCTTACACTTCAGCAGTCACCAGTTACGGAACCGGTTTGCAACCGAGCGATTTGAGCTTCAGTGTGCCGAGGATCAGGGCGGAGAGGGTTCAAGGCGTGGTGGTGATTTACGCGACGGTGGTGTTGCCTCCTGGTGGGACGAGTTTTAATCAAGTGTGGCAGGTGGGTCCGGTTACTAATGGAGCTCCGGCCATTCATGCCTTGGATCCCGCTAACCGGAATTCCGTCGGAGTTGTGGATTTTAGCACCGGTGAGACTACTGCCAGCGGCGCTGTTGGTGGGGCACGACTTCGCCGGAGAAACAGACATGGAGTATTGAACGCGGTTAGTTGGGGAGTTTTGATGCCTATGGGTGCTATGGCTGCAAGATACTTAAAGGTCTTTACTGTGGCTAACCCAGCTTGGTTTTACATCCATGTTGCTACCCAAACATCAGCCTATATCGTCGGTGTAGCCGGATGGGCCACCGGTCTCAAGCTCGGCAGTGACTCCACCGGAATTACATATGATACTCACCGGAACATCGGAATCATCCTGTTTTCTCTTGCAACACTTCAGGTTTTTGCTCTGCTGTTGAGGCCTAAACCAGACAACAAGTACAGATTCTACTGGAACATCTACCATCATTCTCTTGGATACTCTATCATCATCTTGAGCATCATCAACGTCTACGAAGGACTCGATATCTTGGACCCGGAGAAGAAATGGAAGAACGCGTACACCGGGATACTCATATCTCTGGGTGTTATTACAGTTATTTTGGAAGCTTTGACATGGTTCATTGTATTGAAGAGGAAGAAAGATGACAAGAGGACACATGCAGGAACCAATGGTGCTAATGGACATGCATAG | 1158 | 50.26 | MGKILSLLLCFLISNLAVSSAQTCGNYAFSSNEIYSTCVSLPVLDSHLHWTYHPSNGSVDLAFRHTGSATSQWVAWALNVGGRGMVGAQALVAVTSSNGSVQAYTSAVTSYGTGLQPSDLSFSVPRIRAERVQGVVVIYATVVLPPGGTSFNQVWQVGPVTNGAPAIHALDPANRNSVGVVDFSTGETTASGAVGGARLRRRNRHGVLNAVSWGVLMPMGAMAARYLKVFTVANPAWFYIHVATQTSAYIVGVAGWATGLKLGSDSTGITYDTHRNIGIILFSLATLQVFALLLRPKPDNKYRFYWNIYHHSLGYSIIILSIINVYEGLDILDPEKKWKNAYTGILISLGVITVILEALTWFIVLKRKKDDKRTHAGTNGANGHA | 385 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00290 | 385 | CDD | Cyt-b561-FRRS1-like | 176 | 358 | - | - | |
| Mimi17g00290 | 385 | Gene3D | - | 185 | 375 | - | - | |
| Mimi17g00290 | 385 | CDD | DOMON-CIL1-like | 35 | 185 | IPR045265 | - | |
| Mimi17g00290 | 385 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 183 | 373 | - | - | |
| Mimi17g00290 | 385 | PIRSF | UCP037471 | 1 | 385 | IPR017214 | - | |
| Mimi17g00290 | 385 | SMART | 561-7 | 204 | 329 | IPR006593 | - | |
| Mimi17g00290 | 385 | ProSiteProfiles | Cytochrome b561 domain profile. | 164 | 365 | IPR006593 | - | |
| Mimi17g00290 | 385 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 6 | 369 | - | - | |
| Mimi17g00290 | 385 | ProSiteProfiles | DOMON domain profile. | 44 | 158 | IPR005018 | - | |
| Mimi17g00290 | 385 | Pfam | Eukaryotic cytochrome b561 | 205 | 329 | IPR006593 | - | |
| Mimi17g00290 | 385 | Pfam | Protein of unknown function (DUF568) | 85 | 183 | IPR045265 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00290 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 129221 | Mimi14g01110 | Mimi17g00290 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr16:79605543 | Mimi17g00290 | Mimi-Chr17:8405924 | dispersed | |
| Mimi | Mimi-Chr17:8405924 | Mimi4g01184 | Mimi-Chr4:23858295 | dispersed | |
| Mimi | Mimi-Chr17:8365482 | Mimi17g00290 | Mimi-Chr17:8405924 | tandem |