AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00295 ATGTTGCTATCACCGGGCCACTCACCCCGCCGGCTATCATCTCCGTCACCGTCGGTATCAGAATCACCGGCTCATCAAACACCTGGATCCTCCAATTCGTTAATCACACCAACTTCTACAAACCCTAGAAAACGCAATCCGTCCACCGTGCTCGATGAGGACACTTACGTTGCTGCGATCGAGAAGATTATCCAACGAGACTTCTTCCCTGATGTTCCAAAACTCCGAGACCGGCTCGATTGGTTGGAAGCTACTCGCACCGGTGATCCGATGTTGATCCGTGACGCGCAGTTGAAGATTATCGAGAGGCGATCTGGAAAAGGAATCGACACGGAAGGTAAAATTCGCACGCCTGGTTCTACTTTTTTTAGGAATACGACTCCTTTGGAGTTGGATAGAACTCCTGGTACTGATAGGTTTGTGAAAGATGAGTTGTTGGATGCAAAGGAGTTGTTGGTTAAGGATGACGGGTCGGTTGATACCGATTCATTATCTCTTGATGAGTTTTTTAGGAGATATACCAGTGAAGATAATGATAGTTTTTCAAAACTAATTGAAAAGGTTAACAAGAACAAGAGATTAAGGTATGAGTTTTTGCTAGAAGGTGAGAATCGCGATAAGGGGTTGATAGAAGGTTCAAAAAGGGATAGGATTACTGATGGTTATGGGACCTCTGATCAGCCTTTAGCTACATTAGATGGTTGGAAGTATACTGCAAAGAATTTGTTGATGTATCATCCTGCTGATAGAGGTGAAGCACCTTTAACTCAAGAAGAACGGGCTAATCGGTTGAAACAGATGACAAAGGAAATCAGCAAGACGAACACACGTTTTCATGGTAAAATGGTGGATTATAGCCCTAAAGAAGATGATGAAGTAGCTGTTATATACAATCCAGTTGCTGGTGGTACACCAGTTCCATGGTCTATGTCGGATAGAGATGGGGACAAGATGAAGAAGTATGATTTAGAAGAGTTAAGAAAGACCCCGAATCCCTTTTATGTTGAATCAAGTAAAAAAGCAGATAACGGGTATAGTTTTGTTAAAACTCCATCACCTGCACCGGGTGTAGACGAATCACCATTCATTACATGGGGAGAGATTGAAGGCACCCCATTGAGATTGGAACCTGAAGATACTCCAATTGACATTGGTGGTAGTGGAAATGGGCCCCAGTTCAATATCCCTCTTCCACCTTCAAGAGATGTCAAGGCTCATACTTTATCCCGAGAGGCTGCTCGGAAGATTAGGGATCGTTCTAAAATGTTCCAGAAACCACCACTGCCATCTGGCGGTGCTAGTCCAGGTGGACGAACACTTTCCCCTGCAGCACAGAAGTTTGTCAGAAACGCGTTTGCAAAGTCTTCTCGTTCTGCTAGTGTTGATGAGTCGCTTCGCGCTAGTTATCGTGGGTCCAGCCCTGGGCATTCTACACCAAAATCTGGAAGAGGTACATCCAGATTGGGGAGAGATAGTAGCTTGAGTTCAAGATCACCTTCTGTTAGGGAGGGTTCTAATCCACCTTGGTAA 1530 44.71 MLLSPGHSPRRLSSPSPSVSESPAHQTPGSSNSLITPTSTNPRKRNPSTVLDEDTYVAAIEKIIQRDFFPDVPKLRDRLDWLEATRTGDPMLIRDAQLKIIERRSGKGIDTEGKIRTPGSTFFRNTTPLELDRTPGTDRFVKDELLDAKELLVKDDGSVDTDSLSLDEFFRRYTSEDNDSFSKLIEKVNKNKRLRYEFLLEGENRDKGLIEGSKRDRITDGYGTSDQPLATLDGWKYTAKNLLMYHPADRGEAPLTQEERANRLKQMTKEISKTNTRFHGKMVDYSPKEDDEVAVIYNPVAGGTPVPWSMSDRDGDKMKKYDLEELRKTPNPFYVESSKKADNGYSFVKTPSPAPGVDESPFITWGEIEGTPLRLEPEDTPIDIGGSGNGPQFNIPLPPSRDVKAHTLSREAARKIRDRSKMFQKPPLPSGGASPGGRTLSPAAQKFVRNAFAKSSRSASVDESLRASYRGSSPGHSTPKSGRGTSRLGRDSSLSSRSPSVREGSNPPW 509
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00295 509 MobiDBLite consensus disorder prediction 404 422 - -
Mimi17g00295 509 MobiDBLite consensus disorder prediction 384 509 - -
Mimi17g00295 509 PANTHER ES-2 PROTEIN - RELATED 15 500 IPR019148 GO:0071013(PANTHER)
Mimi17g00295 509 MobiDBLite consensus disorder prediction 451 503 - -
Mimi17g00295 509 MobiDBLite consensus disorder prediction 9 46 - -
Mimi17g00295 509 MobiDBLite consensus disorder prediction 1 50 - -
Mimi17g00295 509 Pfam Nuclear protein Es2 47 447 IPR019148 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00295 K13118 protein DGCR14
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr17:8479412 Mimi6g01740 Mimi-Chr6:64178216 dispersed