Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mimi17g00298	ATGAATCTGTACTCCTATGTCATACTTGATATGGATTTTTCTGAATCTACTAAAGTCGTATATGATAGAGTCCAAAAGATTGAACCCGAAAACGTCTCCAAGATTATCGGGTACCTTCTTTTACAAGATCATGGTGAACGTGAAATGATAAGATTAGCATTCGGGCCGGATAATTTAATACACAATTTAATCAATAAAGCCAAATTCCACCTCAAGTTATTACCTTCAAACACAACTGGTAGTCAGCCGATTTCACCTCGGATCAACTCTATACCTGATATGCCAATTGGCTCGATTCACTTCACACCTTTCTCACCTTCAGCCCGTCACTCACCATTAACGATCCAAGTTCCCACCCGTTGTTGTGATCCCCATGGTCAACCCATTGATTTTGTTCCCATGGTTTATCCTGCCTCATATCCTGAAGACTACCACCTTCACAACCACCTTCATTTCATGTCTTTAGAGGACCAAATGGAGCCTGCTAACAGCCCGGATTATAACACTAGTAATTACTATCCACCCGAGCCTGCATTGGGTCCTCGGGCCAATAGGAGGTCGCCAAGTTTACCCGAATTTCCTTTTAAAATTTGTCATTACTTCATTAAAGGGTTTTGTAGACATGGAAACAACTGTAGGTATTTACACCCTACTCCTGAAAGCTTTTCACAAATCTTTAACTCTAAACTGAGCGAGGACGATAACGTCTTTTCACCCATGTCTCTTGACAAACTAGAGTTAGAACTCACTGAGTTACTGAAGTCAAGAAGAGGGTTTCCTGTTTCCATAGCTTCTTTACCAATGATATACTATGAAAAGTTTGGTAAAACGCTTCAAGCTGAGGGATATTTGACCGAAAGTCAAAGGCATGGGAAAGCCGGTTATAGTTTGACCAAACTTCTCGCTCGCCTGAAAAGCATTTGTCTCATTGATAGGCCACATGGGCAACACGCAGTAGTGCTGGCTGATGACATGGCAAATTACATGGATCATATTGGAGATAGAAATGAACATGGTGGAATCGTGGCGGGTTCTAGACAGATATACTTGACTTTTCCTGCTGAAAGTACATTTTCTGAGCTTGATGTCTACAACTATTTCAACAAATTCGGGCCTGTTCGTGACGTTAGAATTCCATGTCAGCAAAAGAGAATGTTTGGATTTGTAACTTTCGTGTTTGCGGATACCGTTAGGCATATTTTAAACAAGGGAAACCCTCATTTTGTTAGTGGTGCACGCGTTCTAGTCAAACCGTATCGTGAAAAATGCAAGATTGATGATAGGAAACATGGTTACACATATCAACATCCTATGTGCCAAGGTCCTCATTATCTTGATACTGAACTCGGGCTGCGATCAAACAATGCTCGTGAACAGCAAATCGACTTCGATTCAACTGAACAGTTTAACTACTTTCTTGAAATTTTTAACAACGGTGCTGCCAGTGAACAGAAAATTATGCAGATCAATACCGAATACAACGAGCAAGAAAGTAGCCAGGGACTGAATCTTCCAGACAGCCCGTTTGCATCCGGATTAGGGGGTGAAATATCGACAGTCATATAG	1566	41.25	MNLYSYVILDMDFSESTKVVYDRVQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHNLINKAKFHLKLLPSNTTGSQPISPRINSIPDMPIGSIHFTPFSPSARHSPLTIQVPTRCCDPHGQPIDFVPMVYPASYPEDYHLHNHLHFMSLEDQMEPANSPDYNTSNYYPPEPALGPRANRRSPSLPEFPFKICHYFIKGFCRHGNNCRYLHPTPESFSQIFNSKLSEDDNVFSPMSLDKLELELTELLKSRRGFPVSIASLPMIYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLADDMANYMDHIGDRNEHGGIVAGSRQIYLTFPAESTFSELDVYNYFNKFGPVRDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKCKIDDRKHGYTYQHPMCQGPHYLDTELGLRSNNAREQQIDFDSTEQFNYFLEIFNNGAASEQKIMQINTEYNEQESSQGLNLPDSPFASGLGGEISTVI	521

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mimi17g00298	521	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	353	424	-	-
	Mimi17g00298	521	Gene3D	-	193	274	-	-
	Mimi17g00298	521	Gene3D	-	352	425	IPR012677	-
	Mimi17g00298	521	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	11	451	-	-
	Mimi17g00298	521	ProSiteProfiles	OST-type HTH domain profile.	241	324	IPR025605	-
	Mimi17g00298	521	SUPERFAMILY	CCCH zinc finger	195	217	IPR036855	GO:0046872(InterPro)
	Mimi17g00298	521	CDD	RRM-AtC3H46-like	348	417	IPR034365	-
	Mimi17g00298	521	Pfam	RNA recognition motif	359	405	IPR000504	GO:0003723(InterPro)
	Mimi17g00298	521	SUPERFAMILY	RNA-binding domain, RBD	358	435	IPR035979	GO:0003676(InterPro)
	Mimi17g00298	521	ProSiteProfiles	Zinc finger C3H1-type profile.	192	219	IPR000571	GO:0046872(InterPro)
	Mimi17g00298	521	SMART	c3hfinal6	194	218	IPR000571	GO:0046872(InterPro)
	Mimi17g00298	521	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	346	421	IPR000504	GO:0003723(InterPro)
	Mimi17g00298	521	SMART	rrm1-1	347	417	IPR000504	GO:0003723(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mimi17g00298	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Mimi	Mimi-Chr17:8583295	Mimi7g00610	Mimi-Chr7:42480289	dispersed
	Mimi	Mimi-Chr4:23707905	Mimi17g00298	Mimi-Chr17:8583295	transposed
	Mimi	Mimi-Chr4:24360887	Mimi17g00298	Mimi-Chr17:8583295	transposed
	Mimi	Mimi-Chr8:14895164	Mimi17g00298	Mimi-Chr17:8583295	transposed
	Mimi	Mimi-Chr17:8583295	Mimi9g01475	Mimi-Chr9:51414086	wgd