AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00383 ATGAGGGAAGAAGGATTCAGCTCGTCTGGCGACCCGTTACTTTCCCCCAATTCTCCTCCTCCTATCGCTGCTGCTAGCTCTGCTGGAGCATCATCACCGGTCGTTGCCACCAATGCTGGCAGTACAGATTGGTTGGGTCATGGTCAGGGGTCGAAAGCTGCTTCACAGTCTCGAATTAGTTCACAGCCCGTGTGGATTTCATTGAGTACAAGTGCTGGTGGTTCAGCTCTTGGTTCATCCAAACCTTCATGTAGACCATGGGAAAGAGGTGATCTTCTAAGAAGATTATCCACATTCAGCCCTGCAAATTGGTTTGGAAAACCTAAGGCTGCTAGTTCACTTTCCTGTGCTAGGAGAGGTTGGGTGAATGTAGATGTTGATGAAATTCAATGTGAGTCTTGTGGGGACACCTTGAAATATAATGCACAAGATTCATGGGCCTGTAAAGAAGGTGAAAATGGTGAAGAATTTGCTAGCCAGCTGGATGAAAGGCATAATGCCACCTGTCCTTGGAGAGGAAACAGCTGTGCTGAAAGCTTGGTTCAGTTCCCGCCTACCCCACCGTCTTCTCTGATTTGTGGTTACAAGGACCGTTGTGATGGGCTAATTCAGTTTCCTTATTTACCTGTTGTGGCTAATTCGGCTATTGACCAAATGAAGCTTTCTAGAGGTCAAGAAATTAACCGACTTCTAGTCCACTCTTCTGCTTATTCGGCTGACATTATGTCTGATTCGGAAATTAGCATATATCTACGTGCCCAGAAGTTGATAAGCTTATGTGGATGGGAGCCTAGGTGGCTTCCCAATGTTCAAGATTGTGAAGAGCATTCTGCTCAATCAGCGAGAAACGGTGGCTCATTCAGTCCAATTAAAGATCATGACCCGTTACAAGAGCGAGGCCCAAACAAGAAACTTTTCTCTAATTCAACCAAAAAAGGTTCTCAGGTCAGGTCAAAATTCGATTCTGGATCGCTGTTGTTGGATTGTAGCTTATGTGGTGCCACAGTGAGAATCTTGGAATTTGTTCGTGTCAATCTTCCTGCTCGTTTAGCTCCTAATATAGATGCTCCTGAAACAAGTAAAAAGATGGCAATCACCCGTGGAGTAAGTGCTGCTAGTGGCGTTAGCGGGTGGGTGGCTGCTGATGAGGCGGAAGAACATACAGAGGACATTGATGAAGCTGCAATGTCAAATGCCAGGATGGATTTAAATCTTACAATGGGAAGTGGGTTTTCCACTGGACATGGGCATAAAAGACCGATATCTGAACTATATCAAGATGGGAATTTAGGTAGGGATCTAGTCATCGGGCAGCCAGCTGGCAGTGAGGTTGGTGACCGTGCAGCATCATATGAATCCCGTGGGCCGACTACTTTCAAAAGGTTTGTTGATGAAGGTGGGTCCACTGTTGATAGACCACACGGGCTGATTCCCCAGGCGGACAGTGTTGAGGGTGTTGTCATTGACCGTGATGGTGATGAAGTCAATGACTGCAAGATGTCCCAGGGCCCATCTAAACGAGCCTGTGAGTCATATTCTGGTGCAGGTCCTAGTCGGACTTTGTATTTTGATATGGGCAGGTCTGGGCCTACAAGCCAAGGCCATGAACATGCAGCAAGGGCTTCTTCTGTTATTGCAATGGACACGATGTGTCATAGTGAAGATAACGATTCTATGGAAAGTGTTGAAAATCATCCAGGCTTTATCGATGAAGTCAACTACCCATCCACATCAGCAATCAACCCTGACCCGAATGAAACTTCAGATATGAACCATAGTATCCAGGCTCAACAAAGCACATGCCCTCCTGCGTTTTGGGTCACCAGTGAAATAGGTGTTAGCAGCACCAATGATGACGAAGTACTGAACACTGAAGCCGCCACGGTTTACAGGCGAGATGGTCCTAGCTTGGCGGTAAGTGGTGGTAGTGTTGGAATGGGTGCAAGTCATGAAGCTGAGATTCATGGTTTGATTCATAGGACAGAAAGTGTTGTAGGTGATATGGAACCCATTACTGGTGTGACTGAGAATCAAGGTCAAACTGGTGAATTTGTTCCTGAAGAAATACAACAAGAATATTCTGGAAGGGGGGATAGTGGGTCAAAGGTTGTTGGTTCGGTCAAAGGTGAATCTGTTGAGAGTGCTGAGAAGACTAGTGATTTGAATCTTTTGCCACATGAACAAAACTCTCACCCTTCTCTTTCTTGCAATGCGGTTGTATATTCAGGCCTTGAAGTATCAAAAGATGAAGTGATGCAGGCTCGCATGTCGTCTCCTAATGAAGAATGTGGGTACCCAAGTGATCCGCCTGCAAATGGATTAGGGCCTCCAAATGGGGAGACCAAATTTGACGAACCTGTTGAGTTTGATCCAATTAAGCATCATAATTTTTTCTGCCCTTGGGTTAATGGTAATGTTGCTGCAGCTGGAGTTATTAACAGTAATAATGGTGCTAGTTCAAGTTCAAGTTCTAGTACTTTAGCTCTTTGTGGCTGGCAGTTAACTTTAGATGCTTTAGATGGCTTTCAAGGGCCTGAACAAAATCAAACCCTTGAATCTGAATCAGCTGCATCTCTGTACAAGGATGATCATCAAGGTTCTGGTAAAAAACTCATGGCACGCCATTCTTTCAACAGAAGCCGTGGCCAAAATTGA 2655 45.42 MREEGFSSSGDPLLSPNSPPPIAAASSAGASSPVVATNAGSTDWLGHGQGSKAASQSRISSQPVWISLSTSAGGSALGSSKPSCRPWERGDLLRRLSTFSPANWFGKPKAASSLSCARRGWVNVDVDEIQCESCGDTLKYNAQDSWACKEGENGEEFASQLDERHNATCPWRGNSCAESLVQFPPTPPSSLICGYKDRCDGLIQFPYLPVVANSAIDQMKLSRGQEINRLLVHSSAYSADIMSDSEISIYLRAQKLISLCGWEPRWLPNVQDCEEHSAQSARNGGSFSPIKDHDPLQERGPNKKLFSNSTKKGSQVRSKFDSGSLLLDCSLCGATVRILEFVRVNLPARLAPNIDAPETSKKMAITRGVSAASGVSGWVAADEAEEHTEDIDEAAMSNARMDLNLTMGSGFSTGHGHKRPISELYQDGNLGRDLVIGQPAGSEVGDRAASYESRGPTTFKRFVDEGGSTVDRPHGLIPQADSVEGVVIDRDGDEVNDCKMSQGPSKRACESYSGAGPSRTLYFDMGRSGPTSQGHEHAARASSVIAMDTMCHSEDNDSMESVENHPGFIDEVNYPSTSAINPDPNETSDMNHSIQAQQSTCPPAFWVTSEIGVSSTNDDEVLNTEAATVYRRDGPSLAVSGGSVGMGASHEAEIHGLIHRTESVVGDMEPITGVTENQGQTGEFVPEEIQQEYSGRGDSGSKVVGSVKGESVESAEKTSDLNLLPHEQNSHPSLSCNAVVYSGLEVSKDEVMQARMSSPNEECGYPSDPPANGLGPPNGETKFDEPVEFDPIKHHNFFCPWVNGNVAAAGVINSNNGASSSSSSSTLALCGWQLTLDALDGFQGPEQNQTLESESAASLYKDDHQGSGKKLMARHSFNRSRGQN 884
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00383 884 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 882 - GO:0005634(PANTHER)
Mimi17g00383 884 MobiDBLite consensus disorder prediction 755 786 - -
Mimi17g00383 884 MobiDBLite consensus disorder prediction 693 718 - -
Mimi17g00383 884 MobiDBLite consensus disorder prediction 845 884 - -
Mimi17g00383 884 MobiDBLite consensus disorder prediction 302 316 - -
Mimi17g00383 884 MobiDBLite consensus disorder prediction 20 57 - -
Mimi17g00383 884 MobiDBLite consensus disorder prediction 1 57 - -
Mimi17g00383 884 Pfam C3HC zinc finger-like 86 206 IPR012935 GO:0008270(InterPro)
Mimi17g00383 884 MobiDBLite consensus disorder prediction 278 316 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00383 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
129217 Mimi14g01084 Mimi17g00383
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr11:32872506 Mimi17g00383 Mimi-Chr17:12453664 dispersed
Mimi Mimi-Chr14:21416885 Mimi17g00383 Mimi-Chr17:12453664 dispersed