Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00448 | ATGACTTCTTCTCATTTCATTTCTTCAACTTCCCTTGTGATTTTACTCACATTTCATCTAATTTCCACCATTTCTGAATCTGCAGTCCCTTCTTCACAAACATTCACCTACGTAAACGAAGGCGATTTCGGCGATTACGTCGTCGAATACGATGCCAATTATCGAGCACTTCCTCCTTTCAGCAGCCCATTTCAGCTTTGCTTCTACAACACCACCCCTAACGCATTCACCCTCGCCCTCCGCATGGGCACGGTTCGATCCGAATCGCTCATGCGATGGGTTTGGGAGGCTAACCGTGGCAACCCGGTTAAAGAAAATGCCACCCTCAAGTTTGGTACCGACGGGAACCTCGTCCTAGCCGATGCTGATGGCCGGGTCGTTTGGCAAACCAACACTGCCAACAAGGGTGTGGTCGGTTTTCAAGTGCTTCCAACCGGTAACATGGTTCTTCATGACGGTAAGGGTAAGTTCATATGGCAAAGCTTTGATTCACCAACCGACACTCTCTTGGTCGGTCAGACTCTCCGAGCCGGTGGTCCGAGTAAGCTCGTGAGTCGGTTTTCGGCCGAGAAGAACGCTGATGGACCGTATAGTTTGGTGTTGGAGCCTAAAGGGTTAGCCATGTATTACAAAAGTCCCAACTCGGCTAGACCGATGGTTTACTGGACGTCCAGCGAATGGTTCACGATTGACAAAGGTAGTTTAACCAATCTAACACTTACCTCGAACCCAGACACCGATGAGGGGTTTCTTTACTACTTAACATTCGATTACTTCACCACAAACCCCACATCGGGGTCTAACCGCAACATGGCGTTTTCGCGATACAACAACACGTTATCGTACCTTCGGTTAGAGATAGACGGGAACCTTAGGTTCTACACGTATAACCCAAACGTGCAAGGGGCCGCGTGGGAGGTGGTGTACACGTTTCTTGATCGTGACTCGATGGAAGGCGAATGTCAGTTACCGAGCCGATGTGGGAAGTTCGGGCTATGCGAGGATAACCAGTGTGTCGCGTGCCCGACCCCAAACGGGCTAAGTGGTTGGAGCAAGGATTGTGATGTAAAAAAGGTGACATCTTGTAAAGCTAGTGACTTTGGGTACTATAAGCTACAAGGGGTTGACCATTTTATGATCAAGTACACGAGGGGTGATGGGCCGACCAAACAAACCGATTGTGAGAGCAAATGCACCAAAGATTGCAAGTGTATGGGCTACTTCTATCACACAGATGGGTCCAGGTGTTGGATTGCTTACGATTTGAGAACGTTGACGAGAGTCGGCAACTCGACTCATTTGGCGTACATAAAATCACCCAACAAGTAG | 1329 | 48.91 | MTSSHFISSTSLVILLTFHLISTISESAVPSSQTFTYVNEGDFGDYVVEYDANYRALPPFSSPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVKENATLKFGTDGNLVLADADGRVVWQTNTANKGVVGFQVLPTGNMVLHDGKGKFIWQSFDSPTDTLLVGQTLRAGGPSKLVSRFSAEKNADGPYSLVLEPKGLAMYYKSPNSARPMVYWTSSEWFTIDKGSLTNLTLTSNPDTDEGFLYYLTFDYFTTNPTSGSNRNMAFSRYNNTLSYLRLEIDGNLRFYTYNPNVQGAAWEVVYTFLDRDSMEGECQLPSRCGKFGLCEDNQCVACPTPNGLSGWSKDCDVKKVTSCKASDFGYYKLQGVDHFMIKYTRGDGPTKQTDCESKCTKDCKCMGYFYHTDGSRCWIAYDLRTLTRVGNSTHLAYIKSPNK | 442 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00448 | 442 | CDD | B-lectin | 48 | 165 | IPR001480 | - | |
| Mimi17g00448 | 442 | ProSiteProfiles | Bulb-type lectin domain profile. | 45 | 163 | IPR001480 | - | |
| Mimi17g00448 | 442 | Pfam | D-mannose binding lectin | 94 | 177 | IPR001480 | - | |
| Mimi17g00448 | 442 | Pfam | S-locus glycoprotein domain | 233 | 346 | IPR000858 | GO:0048544(InterPro) | |
| Mimi17g00448 | 442 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 38 | 439 | IPR051343 | - | |
| Mimi17g00448 | 442 | SMART | blect-4 | 48 | 165 | IPR001480 | - | |
| Mimi17g00448 | 442 | Pfam | PAN-like domain | 388 | 418 | IPR003609 | - | |
| Mimi17g00448 | 442 | CDD | PAN-AP-plant | 361 | 440 | - | - | |
| Mimi17g00448 | 442 | PIRSF | SLG | 3 | 442 | IPR035446 | - | |
| Mimi17g00448 | 442 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 73 | 210 | IPR036426 | - | |
| Mimi17g00448 | 442 | Gene3D | - | 93 | 226 | IPR036426 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00448 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:14954459 | Mimi17g00448 | Mimi-Chr17:15199959 | dispersed | |
| Mimi | Mimi-Chr17:15047201 | Mimi17g00448 | Mimi-Chr17:15199959 | dispersed | |
| Mimi | Mimi-Chr17:15199959 | Mimi19g00675 | Mimi-Chr19:46829133 | dispersed | |
| Mimi | Mimi-Chr17:15082709 | Mimi17g00448 | Mimi-Chr17:15199959 | proximal |