AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00454 | ATGGCGGCTTCTGCTCAACGAGAAAACTTCATCTACGTCGCAAAGCTTGCTGAGCAAGCTGAACGCTATGACGAGATGGTGGATGCCATGAAGAAAGTAGCAAAGTTGGATATTGAATTGACTGTAGAGGAGAGGAATTTGCTGTCAGTTGGATACAAGAATGTGGTGGGTTCACGTAGGGCATCATGGAGGATATTGTCTTCCATTCAGCAAAAAGAGGAGTCAAGAGGCAATGAAGTTAATGTAAAGCGGATTAAGGATTACATACAGAAGGTTGAAACAGAGCTGTCTAACATTTGCAGTGATATCATGACTGTTATTGATGAGCACCTGATTCCATCTTCCTCTGCTGGAGAATCAACTGTTTTCTACTACAAGATGAAAGGGGACTATTATAGGTATCTTGCAGAGTTTAAGTCTGGTAATGATAAAAAAGAAGCAGCTGATCAGTCGTTGAAGGCTTATCAATCGGCTTCTACTGCTGCAGAAGATTTACCTCCTACACATCCTATCCGATTGGGTTTGGCTTTGAACTTCTCTGTTTTCTATTATGAGATCATGAACTCTCCTGAAAGAGCCTGCCACCTGGCAAAACAAGCTTTTGATGAAGCGATCTCAGAACTTGACTCCTTGAGTGAGGAATCATACAAAGATAGCACTTTAATCATGCAGCTCCTGAGGGACAACCTCACTTTGTGGACTTCTGACATACCCGAGGATGGAGAAGACCAAAAGATGGAGATCACAAAATCTGGCGCAGAAGATGCTGAGTTGTGCAAATGCCCGGGAAATGGGACGTTATGTCAGGCCCTTTAG | 816 | 43.26 | MAASAQRENFIYVAKLAEQAERYDEMVDAMKKVAKLDIELTVEERNLLSVGYKNVVGSRRASWRILSSIQQKEESRGNEVNVKRIKDYIQKVETELSNICSDIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKSGNDKKEAADQSLKAYQSASTAAEDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMEITKSGAEDAELCKCPGNGTLCQAL | 271 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00454 | 271 | Gene3D | - | 1 | 249 | IPR036815 | - | |
| Mimi17g00454 | 271 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Mimi17g00454 | 271 | Coils | Coil | 194 | 214 | - | - | |
| Mimi17g00454 | 271 | ProSitePatterns | 14-3-3 proteins signature 2. | 216 | 235 | IPR023409 | - | |
| Mimi17g00454 | 271 | PANTHER | 14-3-3 PROTEIN | 6 | 239 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Mimi17g00454 | 271 | Pfam | 14-3-3 protein | 14 | 234 | IPR023410 | - | |
| Mimi17g00454 | 271 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Mimi17g00454 | 271 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Mimi17g00454 | 271 | PRINTS | 14-3-3 protein zeta signature | 207 | 236 | IPR000308 | - | |
| Mimi17g00454 | 271 | PRINTS | 14-3-3 protein zeta signature | 180 | 206 | IPR000308 | - | |
| Mimi17g00454 | 271 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Mimi17g00454 | 271 | PRINTS | 14-3-3 protein zeta signature | 153 | 179 | IPR000308 | - | |
| Mimi17g00454 | 271 | FunFam | 14-3-3 protein epsilon | 3 | 247 | - | - | |
| Mimi17g00454 | 271 | SUPERFAMILY | 14-3-3 protein | 6 | 236 | IPR036815 | - | |
| Mimi17g00454 | 271 | PIRSF | 14-3-3 | 1 | 247 | IPR000308 | - | |
| Mimi17g00454 | 271 | Coils | Coil | 13 | 33 | - | - | |
| Mimi17g00454 | 271 | SMART | 1433-4 | 7 | 247 | IPR023410 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00454 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 129208 | Mimi14g01045 | Mimi17g00454 | |
| 129743 | Mimi17g00454 | Mimi4g01083 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr15:89103591 | Mimi17g00454 | Mimi-Chr17:15586045 | dispersed | |
| Mimi | Mimi-Chr17:15586045 | Mimi4g01083 | Mimi-Chr4:20767642 | dispersed | |
| Mimi | Mimi-Chr14:20646292 | Mimi17g00454 | Mimi-Chr17:15586045 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Mimi19g00924 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 84.615 | 1.64e-155 | 443.0 | |
| Mimi18g01830 | . | 3 | 254 | 14-3-3 family | AT3G02520 | 88.095 | 3.13e-164 | 453.0 | |
| Mimi18g01850 | . | 3 | 254 | 14-3-3 family | AT3G02520 | 88.095 | 3.13e-164 | 453.0 | |
| Mimi17g00454 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 76.426 | 1.25e-150 | 419.0 | |
| Mimi16g01735 | . | 197 | 248 | 14-3-3 family | AT1G26480 | 57.692 | 1.71e-13 | 67.8 | |
| Mimi15g02062 | . | 6 | 263 | 14-3-3 family | AT2G42590 | 76.062 | 1.67e-139 | 400.0 | |
| Mimi13g02047 | WGDA | 2 | 259 | 14-3-3 family | AT1G78300 | 84.942 | 3.99e-162 | 448.0 | |
| Mimi12g00802 | . | 9 | 265 | 14-3-3 family | AT1G35160 | 85.992 | 5.93e-166 | 458.0 | |
| Mimi12g02200 | . | 1 | 247 | 14-3-3 family | AT5G65430 | 85.2 | 6.22e-160 | 441.0 | |
| Mimi10g01447 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 82.101 | 8.56e-158 | 437.0 | |
| Mimi8g00107 | WGDA | 1 | 259 | 14-3-3 family | AT1G78300 | 86.973 | 2.66e-166 | 458.0 | |
| Mimi6g00507 | . | 193 | 242 | 14-3-3 family | AT2G42590 | 66.0 | 1.78e-14 | 70.5 | |
| Mimi5g00897 | . | 11 | 259 | 14-3-3 family | AT1G78300 | 69.076 | 4.20e-118 | 334.0 | |
| Mimi5g00936 | . | 4 | 247 | 14-3-3 family | AT5G10450 | 84.426 | 3.63e-156 | 432.0 | |
| Mimi5g01352 | . | 193 | 250 | 14-3-3 family | AT2G42590 | 55.172 | 2.77e-14 | 70.1 | |
| Mimi4g01083 | ACH,WGDA | 1 | 243 | 14-3-3 family | AT2G42590 | 81.07 | 1.34e-149 | 416.0 | |
| Mimi3g01898 | ACH | 3 | 253 | 14-3-3 family | AT1G78300 | 86.111 | 4.44e-159 | 440.0 | |
| Mimi1g00099 | . | 193 | 242 | 14-3-3 family | AT2G42590 | 64.0 | 3.42e-14 | 70.1 | |
| Mimi1g01614 | ACH | 6 | 262 | 14-3-3 family | AT1G35160 | 85.659 | 1.73e-162 | 449.0 | |
| Mimi1g02410 | . | 3 | 257 | 14-3-3 family | AT3G02520 | 89.804 | 1.50e-168 | 464.0 |