AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00542 ATGGGGAGAGCAGGAAGAGATTGGACTCAGATCTACGCGATCTACGGCATGGACGATTGGCACACACCGATCTTCCTGTTGATCCACGCGATTGTATTCTCCGCATCATCGATCTCATTCCTTCTATATTTCAATCAGATCTGCTACTCCTTCGAATCAATCTCCAATTCCGTATTCTCCGGTGGTATTGCCAGATTCGCAGCCGGATTCACCGGCTCCGTCATGGCTCTTTCTGCCGTCTGCCTCTTCTACGCCGCCGGCAACATGTTCTACTCCTCCGTTGCCCTACGCTGGGACATGGCTCAGCGCATGGTCAGCGCAGTCAACGACTGGTCCTCCGTCAAGACCGTACTCGACGTCGGTTGCAGCCGCGGCATCCTCCTTAACGCGGTTGCGATGGAGCTGAAAAAAGAAGGCAGCTCAGGCCGGGTCGTTGGGTTAGACCGGAAGAATACCACGTTATCAACTCTACGCACCGCAGCTATGGAGGGCGTGCAGGAGTACGTGACATGCCGAGAGGGAGACGCTCGTCGGCTTCCGTTTCCCGACAACTATTTCGACGTGGTGGTGTCGGCGGGGTTCGTGCACACGGTGGGAAAGGAGTTCGGAGCGAAGACGGCAGCGGCGGCGGCGGAGAGGATGCGGGTGGTGGGGGAGGTGGTGCGGGTGTTGAAGGAGGGTGGCGTAGGGGTGGTATGGGATCTGGTTCATGTGCCGGAGTACGTTCTCCGGCTGCAAGAACTGAAGATGGAGGATATCAGATTGTCGGAGAGGGTAACGGCGTTCATGGCCAACAGCCATATTGTGTCGTTCCGGAAGCCCAGCCAGCACGTGTGGGGGCCCAATGAAGTCAGATTGGATTGGAGATTCAACAATATCTTTTGA 885 56.38 MGRAGRDWTQIYAIYGMDDWHTPIFLLIHAIVFSASSISFLLYFNQICYSFESISNSVFSGGIARFAAGFTGSVMALSAVCLFYAAGNMFYSSVALRWDMAQRMVSAVNDWSSVKTVLDVGCSRGILLNAVAMELKKEGSSGRVVGLDRKNTTLSTLRTAAMEGVQEYVTCREGDARRLPFPDNYFDVVVSAGFVHTVGKEFGAKTAAAAAERMRVVGEVVRVLKEGGVGVVWDLVHVPEYVLRLQELKMEDIRLSERVTAFMANSHIVSFRKPSQHVWGPNEVRLDWRFNNIF 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00542 294 Gene3D Vaccinia Virus protein VP39 89 272 IPR029063 -
Mimi17g00542 294 Pfam Methyltransferase domain 118 230 IPR013216 GO:0008757(InterPro)
Mimi17g00542 294 CDD AdoMet-MTases 116 236 - -
Mimi17g00542 294 PANTHER EXPRESSED PROTEIN 1 289 - -
Mimi17g00542 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 288 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00542 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr13:97907332 Mimi17g00542 Mimi-Chr17:19971413 dispersed