AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00556 | ATGCAAGATGACGCGCTTCAACTCGCAGCCAAAGCGCTCGATTTCTTTGATGTAACCGAAGCAACTGAAATAGCACGAGTTATTAAACAGGAGTTCGATAGGATGTATGGAGGTGGATGGCAGTGTATCGTAGGGACGAATTTTGGGTCGTTTGTGACTCATTGTTACGGGTCGTTCATTCATTTTTCAATCGGAAATCTTGCTATCTTGTTGTTTAGAGGATCGGCAGCTCCGGAGATTGATGAATTTTCGGGTTTGGATGGTGTAAAAGCATGA | 276 | 43.84 | MQDDALQLAAKALDFFDVTEATEIARVIKQEFDRMYGGGWQCIVGTNFGSFVTHCYGSFIHFSIGNLAILLFRGSAAPEIDEFSGLDGVKA | 91 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00556 | 91 | SMART | Dynein-light-2 | 1 | 74 | IPR001372 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Mimi17g00556 | 91 | FunFam | Dynein light chain | 1 | 75 | - | - | |
| Mimi17g00556 | 91 | PANTHER | DYNEIN LIGHT CHAIN | 1 | 73 | IPR001372 | GO:0005868(PANTHER)|GO:0007017(InterPro)|GO:0030286(InterPro)|GO:0045505(PANTHER) | |
| Mimi17g00556 | 91 | Pfam | Dynein light chain type 1 | 1 | 73 | IPR001372 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Mimi17g00556 | 91 | SUPERFAMILY | DLC | 1 | 74 | IPR037177 | GO:0007017(InterPro)|GO:0030286(InterPro) | |
| Mimi17g00556 | 91 | Gene3D | Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 1 | 74 | IPR037177 | GO:0007017(InterPro)|GO:0030286(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00556 | K10418 | dynein light chain LC8-type |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:20857166 | Mimi3g00753 | Mimi-Chr3:14031812 | dispersed |