Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00558 | ATGTCTCTCACCGATCAGCACCGTTCTCATTCTGATGGAAAGCACCGGCGATTTTTTCCGTTTTGGCAATCTGGAACAAAATCTTCGTTGCATTCGAATCATCTTCAATTTCAGAGTCAGAATAGCCAAGAAAACTGCGTCGCATCGAATGGCCGTTCTTCAAACAAGCTATCCTCGGTCGCGAAATCGCTTATACCGGCTCGGCGACGACTCCGGCTTGATCCGGCTAACAGTCTCTACTTTCCGTACGAGCCTGGTAAACAGGTGAAAAGTGCTGTTCGGATCAAGAACCATTGCAGTTCTTATGTTGCTTTTAAGTTTCAAACCACTGCTCCTAAGAGCTGTTATATGCGACCTCCTGGTGGTATTCTGGCTCCTGGGGAAAGCCTTATTGCTACAGTTTTCAAGTTTGTTGAGCAACCGGATAAAAACGAAAAACAAGGGGACCAAAGGAGCAGGGTCAAGTTCAAGATCATGAGCCTCAAGGTGAAAGAAGGAACAGACTTTGTGCCTGAACTGTTTGATGAGCAAAAGGATGAAGTAGTTGTTGAGCGCATTTTGCGTGTTGTATTCTTAGATGCGGACCGCCCTACCCCTGCATTGGAAAAACTAAAATATCAGCTGGCTGAAGCCGAAGCTGAATTAGAATTAAGGAAAAAACCTCAAGTGGATGCGAGTCCAAAAGTTGCGGCCCAAGGACTTGTTATAGATGAGTGGATGAAACCTTTGAATAAAGCTTGTTTTGTTGTAGGCATGGGAGCTGTTATAGGACTGAAACATCGCATGTTTAGACGCAAATCGCACTCCATTTGGCAAGTCGTTGGTCCATCGGTGGCTCAAGCATCGCATCAAGTCTTGATGGAAACAAGGAAACCAAGAGATGCCAAAGAATCATTGAGGGTTGTAGCTTATTTGAGTTGCTGGGGTCCTTACCAGTAA | 939 | 45.26 | MSLTDQHRSHSDGKHRRFFPFWQSGTKSSLHSNHLQFQSQNSQENCVASNGRSSNKLSSVAKSLIPARRRLRLDPANSLYFPYEPGKQVKSAVRIKNHCSSYVAFKFQTTAPKSCYMRPPGGILAPGESLIATVFKFVEQPDKNEKQGDQRSRVKFKIMSLKVKEGTDFVPELFDEQKDEVVVERILRVVFLDADRPTPALEKLKYQLAEAEAELELRKKPQVDASPKVAAQGLVIDEWMKPLNKACFVVGMGAVIGLKHRMFRRKSHSIWQVVGPSVAQASHQVLMETRKPRDAKESLRVVAYLSCWGPYQ | 312 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00558 | 312 | Pfam | MSP (Major sperm protein) domain | 71 | 178 | IPR000535 | - | |
| Mimi17g00558 | 312 | SUPERFAMILY | PapD-like | 59 | 201 | IPR008962 | - | |
| Mimi17g00558 | 312 | Gene3D | Immunoglobulins | 66 | 194 | IPR013783 | - | |
| Mimi17g00558 | 312 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 70 | 192 | IPR000535 | - | |
| Mimi17g00558 | 312 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 70 | 242 | IPR016763 | GO:0005789(PANTHER)|GO:0005789(InterPro)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00558 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr10:43480823 | Mimi17g00558 | Mimi-Chr17:20894502 | dispersed | |
| Mimi | Mimi-Chr17:20894502 | Mimi2g00956 | Mimi-Chr2:72446364 | dispersed | |
| Mimi | Mimi-Chr17:20894502 | Mimi17g02987 | Mimi-Chr17:93508715 | wgd |