AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00806 | ATGTTAGACGATGATGATGGTGAAGAGCGAAACTCACCCCAACCACCTTCATTTGCTCAGTTAAATCCAATAATTGGAAACAACCAAACTTGGGATGATTATTGGAATAAGATGAAAACATACTACAACGATGCACCGCCTGTTGTTTCAAGATATGCTCATAAGCGAAGAAGTCATTGGCATATGTTTAAGTCAAAGGTAAATAGATTTCATGACTTATATTTGCAGGTGAAGTCTCGTTACAGAAGTGGTTGGTCAGACGACCAGTATCTCGTGGAGGCCAGACTTTTGTATATCAATGATCCATCCAAGAGGACTTCTGCTCCTTACACATATGAACATAAAAACAGCAGCGGAGGGTACATAAATTCTGCTTCTAACGCCAACTTTGGTGACAATCCTGAAATGTTTGTATCACTTGAAGACGATGATGATGAGCAGGAACCTCCATACGAACCTCCATCTCGTCCAATTGGGAGGGACAATGCCAAAGCAAAGGCCAAGCTCAAAGATGATGAACAAGTCCCACAAAACATCCCAAAGATGTTGACTAAACACTTTCAATCTCTCATTTCAGATGATGTTGAAGAAATAACGATGCCGTTGTTTGCACTTGATGCTGAAGAGGAGGATAATTTACAAGAGGGAAGTTCTTCTAGACGCAAGGGCAAACGAAAATACATAAATAAAGGCCGGAAGGATGGAGACACCCGTTTGTGGAACGATTACTTTGCTCCAGATCTAGTATACGATGAAAGCTTCTTTAGAGGAAGGGTTTCTGATCAAATGGCATCTGCCTTTCTTTCAAGAACACTCTATGCACGTCGTTTCGTTTCATCTACTCCAATCATCCAAAGCCCCCAAAAATTAGCCTCCGTTTTTTTTAAGAAACCCTGTCAATTGTGGGCTAGCCCAACCCGCGCGACATATAGGAGGCTTACTTTTGTCCGTGGTGATATGGCTGCTGCTATGGCTGGATCCACAGCTTCTTTTTCGACACGAACAATGTCGACCGGTGAGCCTGTTGTTTCAGTTGACTGGCTCCATGCCAATCTGCGTGAGCCTGATTTGAAGGTGCTGGATGCTTCCTGGTACATGCCTGATGAACAGAGAAATCCACTCCAGGAGTACCAGGTTGCCCACATTCCCGGTGCTCTTTTCTTTGATGTAGACGGGATATCAGATCAAACTACTAATTTACCACACATGTTGCCATCTGAGGAAGCATTTGCTGCTGCTGTGTCTGCTCTTGGTATTGAAAACAAAGATGGAGTTGTGGTTTATGATGGTAAAGGGATCTTCAGTGCTGCACGTGTCTGGTGGATGTTCCGAGTTTTTGGACATGATAGAGTATGGGTATTAGATGGAGGGCTTCCAAGATGGCGTGCTTCAGGATTTGATGTTGAATCTAGTGCTTCTGGTGATGCAATTTTGAAAGCTAGTGCTGCCAGCGAGGCGATTGAGAAAGTATACCATGGGCAGCCTGTTGGTCCAGTTACATTTCAAACAAAATATCAGCCGCATCTTGTATGGACACTTGAACAGGTTAAAAAGAACACAGATGACCAAACACATCAACACATAGATGCTCGGTCAAAAGCTAGGTTTGATGGTGTTGCAGCTGAGCCTCGGAAAGGAATAAGAAGCGGCCATGTGCCTGGGAGTAAATGCGTTCCTTTTGTCCATATGTTAGATAGCTCACAGACACTGCTACCTGCAGACCATCTCAAGAAAAAGTTTGAACAAGAAGGGATCACATTGGACAGTCCTATCATGGCTTCATGTGGGACTGGTGTTACTGCATGCATTCTTCTGCTGGGACTCCATCGACTTGGGAAGACAGATGTTCCGGTTTATGATGGATCTTGGACTGAATGGGGAGCACAAGAAGATACACCTGTTTCGACTTCAACTCCGGCTTCTACTTCTTGA | 1932 | 44.05 | MLDDDDGEERNSPQPPSFAQLNPIIGNNQTWDDYWNKMKTYYNDAPPVVSRYAHKRRSHWHMFKSKVNRFHDLYLQVKSRYRSGWSDDQYLVEARLLYINDPSKRTSAPYTYEHKNSSGGYINSASNANFGDNPEMFVSLEDDDDEQEPPYEPPSRPIGRDNAKAKAKLKDDEQVPQNIPKMLTKHFQSLISDDVEEITMPLFALDAEEEDNLQEGSSSRRKGKRKYINKGRKDGDTRLWNDYFAPDLVYDESFFRGRVSDQMASAFLSRTLYARRFVSSTPIIQSPQKLASVFFKKPCQLWASPTRATYRRLTFVRGDMAAAMAGSTASFSTRTMSTGEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDQTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGFDVESSASGDAILKASAASEAIEKVYHGQPVGPVTFQTKYQPHLVWTLEQVKKNTDDQTHQHIDARSKARFDGVAAEPRKGIRSGHVPGSKCVPFVHMLDSSQTLLPADHLKKKFEQEGITLDSPIMASCGTGVTACILLLGLHRLGKTDVPVYDGSWTEWGAQEDTPVSTSTPASTS | 643 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00806 | 643 | CDD | TST-Repeat-2 | 512 | 628 | - | - | |
| Mimi17g00806 | 643 | MobiDBLite | consensus disorder prediction | 132 | 173 | - | - | |
| Mimi17g00806 | 643 | MobiDBLite | consensus disorder prediction | 209 | 231 | - | - | |
| Mimi17g00806 | 643 | PANTHER | THIOSULFATE SULFERTANSFERASE | 338 | 638 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Mimi17g00806 | 643 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 340 | 471 | IPR036873 | - | |
| Mimi17g00806 | 643 | Gene3D | - | 335 | 476 | IPR036873 | - | |
| Mimi17g00806 | 643 | SMART | rhod-4 | 511 | 632 | IPR001763 | - | |
| Mimi17g00806 | 643 | SMART | rhod-4 | 343 | 467 | IPR001763 | - | |
| Mimi17g00806 | 643 | Pfam | Rhodanese-like domain | 344 | 463 | IPR001763 | - | |
| Mimi17g00806 | 643 | Pfam | Rhodanese-like domain | 512 | 628 | IPR001763 | - | |
| Mimi17g00806 | 643 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 514 | 639 | IPR036873 | - | |
| Mimi17g00806 | 643 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Mimi17g00806 | 643 | FunFam | Sulfurtransferase | 506 | 637 | - | - | |
| Mimi17g00806 | 643 | CDD | TST-Repeat-1 | 342 | 465 | - | - | |
| Mimi17g00806 | 643 | ProSitePatterns | Rhodanese signature 1. | 377 | 388 | IPR001307 | GO:0004792(InterPro) | |
| Mimi17g00806 | 643 | ProSiteProfiles | Rhodanese domain profile. | 353 | 470 | IPR001763 | - | |
| Mimi17g00806 | 643 | FunFam | Sulfurtransferase | 335 | 477 | - | - | |
| Mimi17g00806 | 643 | Gene3D | - | 506 | 638 | IPR036873 | - | |
| Mimi17g00806 | 643 | MobiDBLite | consensus disorder prediction | 159 | 173 | - | - | |
| Mimi17g00806 | 643 | ProSitePatterns | Rhodanese C-terminal signature. | 616 | 626 | IPR001307 | GO:0004792(InterPro) | |
| Mimi17g00806 | 643 | ProSiteProfiles | Rhodanese domain profile. | 521 | 635 | IPR001763 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00806 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:44107298 | Mimi18g02300 | Mimi-Chr18:93432997 | dispersed | |
| Mimi | Mimi-Chr13:8757741 | Mimi17g00806 | Mimi-Chr17:44107298 | transposed | |
| Mimi | Mimi-Chr18:13828237 | Mimi17g00806 | Mimi-Chr17:44107298 | transposed | |
| Mimi | Mimi-Chr14:87596032 | Mimi17g00806 | Mimi-Chr17:44107298 | wgd | |
| Mimi | Mimi-Chr15:1150022 | Mimi17g00806 | Mimi-Chr17:44107298 | wgd | |
| Mimi | Mimi-Chr17:44107298 | Mimi3g01906 | Mimi-Chr3:63936686 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Mimi18g00642 | . | 58 | 96 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 66.667 | 8.47e-11 | 57.0 | |
| Mimi18g01645 | . | 73 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 83.333 | 1.09e-94 | 272.0 | |
| Mimi18g02031 | . | 7 | 383 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 61.942 | 4.12e-166 | 469.0 | |
| Mimi18g02042 | . | 7 | 383 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 61.942 | 4.12e-166 | 469.0 | |
| Mimi17g00806 | . | 1 | 374 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 71.011 | 0.0 | 562.0 | |
| Mimi17g01028 | . | 11 | 581 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 63.668 | 0.0 | 764.0 | |
| Mimi16g01956 | . | 7 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 60.697 | 2.55e-82 | 242.0 | |
| Mimi16g02020 | . | 7 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 60.697 | 4.85e-83 | 244.0 | |
| Mimi15g00154 | . | 94 | 299 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 66.346 | 2.92e-104 | 304.0 | |
| Mimi15g00636 | . | 50 | 222 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 29.787 | 1.23e-12 | 67.8 | |
| Mimi15g00757 | . | 4 | 181 | Sulfurtransferasese/Rhodanese gene family | AT4G35770 | 49.171 | 3.39e-59 | 181.0 | |
| Mimi13g01708 | . | 72 | 205 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 27.333 | 1.12e-09 | 58.2 | |
| Mimi12g00114 | . | 83 | 423 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 65.689 | 2.17e-163 | 466.0 | |
| Mimi12g00357 | . | 82 | 242 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 42.593 | 1.49e-29 | 118.0 | |
| Mimi12g01902 | . | 36 | 458 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 67.29 | 0.0 | 580.0 | |
| Mimi8g00223 | . | 1 | 464 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 67.019 | 0.0 | 646.0 | |
| Mimi8g00435 | . | 1 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 65.306 | 6.65e-139 | 392.0 | |
| Mimi8g00525 | . | 53 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 74.167 | 2.54e-135 | 382.0 | |
| Mimi8g01107 | . | 17 | 145 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 69.466 | 6.88e-68 | 199.0 | |
| Mimi8g01563 | . | 133 | 348 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 29.075 | 1.51e-17 | 83.6 | |
| Mimi6g00620 | WGDA | 24 | 151 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 53.488 | 4.95e-46 | 145.0 | |
| Mimi5g00927 | . | 422 | 490 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 32.051 | 2.16e-06 | 42.4 | |
| Mimi5g00928 | . | 342 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 29.386 | 7.42e-19 | 83.2 | |
| Mimi5g01105 | . | 1 | 230 | Sulfurtransferasese/Rhodanese gene family | AT2G42220 | 66.957 | 7.46e-113 | 322.0 | |
| Mimi4g00290 | . | 1 | 456 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 52.891 | 5.88e-136 | 396.0 | |
| Mimi4g00791 | . | 10 | 116 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 53.271 | 5.24e-37 | 124.0 | |
| Mimi1g02341 | WGDA | 28 | 156 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 53.846 | 9.46e-44 | 139.0 |