AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00822 ATGTCGGAACACAGCATCGTTAGCACGGCCAGCGGGCCGGATTTCAACCTACCGGACGAGATTCTATCGGTAATCCCTACCGATCCGTACGACCAGCTAGATCTTGCTCGGAAGATCACGTCAATGGCGCTAGCATCTCGCGTTTCGAAACTGGAGTCGGAGGCAGCGAGGTTAAGGCAGAAGTTGAACGAGAAAGATCGTGTTATGTTGGAGCTTGAAGAGAAAGTTTCTGAGCTCCAGCAGACGTGTCATAATGTTCAGTTGCGGTTGCAGATTACGATGGAAGATAATATGAAACTTGCGGAGGAGAGAGATTCGTTGGCTGCGGTCACTAAGAAACTAGGGCGCGATTTAGCTAAGCTGGAGGCATTCAAGCGACACCTAATGCAGTCACTGAACGACAATGATTCAACTCCTGCATCAACTGTAGATATAGGTACCTATGACCAATCTGCTCCCAAAGCTTATCCGGTTAAAGAAGAGGAGACAAATGGCTATCAAAGGCATCATTCTTATAGTGGCTCTATTGATAATGGAAATAAACATGATGACGCCTCAAAGCTTGCAGGTCAAAGGTTTTCTGTGACACCATATATCAGCACACGTGTAACTCCAACTGCAACCCCCAAAACTATGTCTGCAAGTGTGTCTCCTCGAAGATATTCTGCTTCTGGTACTACATCCCCTGCAAAACTTCAATATGAAGGTCGTACCACATTGTCATCATGGTACCCATCAAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCACGTGGGCCCCCGTTACCAGGACGTGCTGCTAAGATTGATGGAAAAGAGGTTTTCCGTCAAGCAAGGAGTCGACTATCTTATGAGCAATTCAGTGCTTTTTTAGCAAATATAAAGCAGTTGAATGCTCAAAAGCAATCTCGTGATGAGACTTTGAGGAAGGCAGAAGATATATTTGGGTCTGATAACAAGGACCTGTATATTTCATTTCAAGCTCTACTAAATCGCAACAAACAGTGA 1008 45.34 MSEHSIVSTASGPDFNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLESEAARLRQKLNEKDRVMLELEEKVSELQQTCHNVQLRLQITMEDNMKLAEERDSLAAVTKKLGRDLAKLEAFKRHLMQSLNDNDSTPASTVDIGTYDQSAPKAYPVKEEETNGYQRHHSYSGSIDNGNKHDDASKLAGQRFSVTPYISTRVTPTATPKTMSASVSPRRYSASGTTSPAKLQYEGRTTLSSWYPSSQQSSAGNSPPRGPPLPGRAAKIDGKEVFRQARSRLSYEQFSAFLANIKQLNAQKQSRDETLRKAEDIFGSDNKDLYISFQALLNRNKQ 335
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00822 335 MobiDBLite consensus disorder prediction 200 255 - -
Mimi17g00822 335 Coils Coil 294 314 - -
Mimi17g00822 335 MobiDBLite consensus disorder prediction 200 266 - -
Mimi17g00822 335 PANTHER OS03G0659800 PROTEIN 14 333 - -
Mimi17g00822 335 Coils Coil 41 89 - -
Mimi17g00822 335 MobiDBLite consensus disorder prediction 159 185 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00822 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr13:16247853 Mimi17g00822 Mimi-Chr17:45258196 dispersed
Mimi Mimi-Chr17:45258196 Mimi4g00878 Mimi-Chr4:16706071 transposed