Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00848 | ATGGATTTAGTGCCTATCGAACCCTCAATTTGGGAAAATTCATTGTATAAAACAATTCCCAAATCTTCCCTTTTCGGATTATCAACAAGAAGATTGCATTGTACCGCCGGCGCCAGCAGATTCAGCAACAGGATTGTCCTCAGAAACTTTCGCGATTTGAGATTGTCAAGAGACATTAGGTACAGTGTTCTTCGTGAAGACAGAGGATTGAGATCTGTTTGGGTCAAAAGTAGCAGCACTGAGAGCCATTCAATTGTGGATTCCAATTTTCTTGAATTTTTGGTGAAAAGAGGGTTGATTTTGGTGGCTGCGTGTTGTGTGATGGGATGTAGAATGGCTGTGGCAGCTGAAGGGGTCTTGAATTCGGGAAATTTTGTGGGTTTTGATCAGATTAAACTGTCGATGGTGAATTCATTGCCTAAGGTTTTGATGGTTCTTAAGGTTTTGAAAGAACAGGGGTTAATCTTGGCTGCACTTTTTGGCCTTTCTGCGTTTTTTTCAATGGCTGAGACTTCAATCACCACTCTTTGGCCATGGAAGGTCCGCGAGTTGGCTGAGAAAGAGTCCGAGAATGGTGTGTTCAAAATGCTCCGCAACGATGTTACTCGGTTCTTAACAACCATTCTTATTGGCACCACTGTTGTAAACATTGGAGCAACAGCACTAGTTACTGAAGCAGCAACTGCAGTATTTGGTGAAGCAGGTGTTAGTGCAGCCACAGGAGTAATGACGGTTGCTGTTTTGTTGCTGACTGAAATAACTCCAAAAAGTATAGCTGTTCATAATGCCACTGAAGTTGCAAGAGTTGTGGTCAGGCCGATTGCATGGCTTTCTTTAGTCTTATATCCTGTTGGAAGAGTTGTAACATATCTCTCTATGGGAATGCTCAAGTTGCTTGGTCTCAAAGGAAGAAGTGAACCATATGTCACTGAGGATGAACTGAAGCTGATGTTACGAGGAGCTGAACTAAGTGGGGCCATAGAAGAGGAAGAACAAGATATGATCGAAAATGTTTTGGAAATAAAAGACACATATGTTCGTGAGGTGATGACACCTTTGGTTGATGTTGTAGCCAGTGATTCCAGTGCAACATTAGTTGATTTCCACACCTTGTGGGTGACTCATCAGTATTCAAGGGTACCAGTTTTTGAACAACGTGTGGATAATATAGTTGGTATTGCATATGCAATGGATCTATTAGACTATGTTCAGAAGGGAGATGTTCTAGAAAGTTCCACTGTGGGGGATGTGGCTCATAAGCCTGCTTATTTTGTGCCTGATTCAATGTCAGTATGGAATCTTCTTAGAGAATTTCGCATCAGGAAGGTACACATGGCTGTTGTTCTGAACGAATATGGTGGGACAGTTGGAATTGTAACACTGGAAGATGTGGTTGAAGAAATTGTTGGTGAAATTTTTGATGAAAATGATTCGAAAGAGGAAATAGATAAAAAGACTGGGTATATTGTGATGAGGGCTGAAGGAATTTATGATGTGGATGCAAATACCTCTATTGACCAGCTTTCTGAAGATCTCAACATAAAGATGCCAGAGGGTCATCAATATGAAACAGTGTCGGGTTTTGTTTGTGAGGCGTTTGGATACATCCCGAAAACAGGTGAACGTATAAAAGTGGTACTTGAGAAGGAAGAGGTTGATGATGAATATATTGAGGATGATGGCGATCGTCAAAATCAAAAAGAAATAGAAAAGAGCCAAATATTTCAAATAGAAATTTTAGCAGGCAATGCTAGAAAAGTTGGTGCGGTGAGGTTTGAACGGGTAAGCCATGAGGAGGACACAGACGTGAAGAAGGTAGTTCCAGTAATCACGGAACGGAAATGGGCTGATGATGATCATGATACAAATAGGATTGAGAATGATGATGATGTAATCCCACATGAGGGAGAATGA | 1914 | 41.22 | MDLVPIEPSIWENSLYKTIPKSSLFGLSTRRLHCTAGASRFSNRIVLRNFRDLRLSRDIRYSVLREDRGLRSVWVKSSSTESHSIVDSNFLEFLVKRGLILVAACCVMGCRMAVAAEGVLNSGNFVGFDQIKLSMVNSLPKVLMVLKVLKEQGLILAALFGLSAFFSMAETSITTLWPWKVRELAEKESENGVFKMLRNDVTRFLTTILIGTTVVNIGATALVTEAATAVFGEAGVSAATGVMTVAVLLLTEITPKSIAVHNATEVARVVVRPIAWLSLVLYPVGRVVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTYVREVMTPLVDVVASDSSATLVDFHTLWVTHQYSRVPVFEQRVDNIVGIAYAMDLLDYVQKGDVLESSTVGDVAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIDKKTGYIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPKTGERIKVVLEKEEVDDEYIEDDGDRQNQKEIEKSQIFQIEILAGNARKVGAVRFERVSHEEDTDVKKVVPVITERKWADDDHDTNRIENDDDVIPHEGE | 637 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00848 | 637 | ProSiteProfiles | CBS domain profile. | 418 | 475 | IPR000644 | - | |
| Mimi17g00848 | 637 | Pfam | Cyclin M transmembrane N-terminal domain | 154 | 331 | IPR002550 | - | |
| Mimi17g00848 | 637 | SUPERFAMILY | CBS-domain pair | 333 | 472 | IPR046342 | - | |
| Mimi17g00848 | 637 | SMART | CorC-HlyC-2 | 490 | 596 | IPR005170 | - | |
| Mimi17g00848 | 637 | Pfam | Transporter associated domain | 492 | 595 | IPR005170 | - | |
| Mimi17g00848 | 637 | Gene3D | - | 325 | 480 | IPR046342 | - | |
| Mimi17g00848 | 637 | MobiDBLite | consensus disorder prediction | 616 | 637 | - | - | |
| Mimi17g00848 | 637 | Gene3D | - | 487 | 580 | IPR016169 | - | |
| Mimi17g00848 | 637 | FunFam | Magnesium-cobalt efflux protein CorC | 327 | 477 | - | - | |
| Mimi17g00848 | 637 | CDD | CBS-pair-CorC-HlyC-assoc | 346 | 466 | IPR044751 | - | |
| Mimi17g00848 | 637 | SUPERFAMILY | FAD-binding-transporter-associated domain-like | 488 | 601 | IPR036318 | GO:0050660(InterPro) | |
| Mimi17g00848 | 637 | ProSiteProfiles | CNNM transmembrane domain profile. | 145 | 331 | IPR002550 | - | |
| Mimi17g00848 | 637 | ProSiteProfiles | CBS domain profile. | 350 | 411 | IPR000644 | - | |
| Mimi17g00848 | 637 | PANTHER | HEMOLYSIN-RELATED | 118 | 605 | - | - | |
| Mimi17g00848 | 637 | Pfam | CBS domain | 346 | 404 | IPR000644 | - | |
| Mimi17g00848 | 637 | Pfam | CBS domain | 414 | 469 | IPR000644 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00848 | K03699 | magnesium and cobalt exporter, CNNM family |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:47544937 | Mimi9g01474 | Mimi-Chr9:51347877 | dispersed |