AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00908 | ATGGGCTCAGTCAAAGAAACAAAACCAACAGAACACGTGGCATTCAAAGACCAGTCAAGACCGATTGCTCAAAATGGCAGTGTTTCAAAATCTACTGAAAAAACAGACTTTACTGAAAGTGGAAAAAGCAGTCTATGCAGAGGAAGTACAAGCACTGATCTAAGTGATGAAAGCAGCTACAGCATTTTAAGCAGCAACATCAGCAAACCTCATAAATCAAACGACTCTCGGTGGGAAGCAATCCAGACCGTCAGATCAAAAGATGGAGTCTTGGGTCTGAACCATTTTAGGTTGTTGAAAAGATTGGGTTGTGGTGATATTGGTAGTGTGTATTTGTGTGAACTTAGTGGTATGAAATCTTATTTTGCAATGAAAGTGATGGATAAAGTGTCACTCGAGGGGCGTAACAAGTTATCGAGAGCGGAAACAGAAAGGGAAATTCTTCAGTCTTTGGATCACCCATTTCTTCCGACTTTGTATACTCATTTCGAGACGGATAAATACTCGTGTTTGGTAATGGAGTTTTGCCCGGGTGGTGATTTGCACATATTAAGACAGAGGCAACCTGCGAAGCGGTTTTGTGAACAAGCTGTCAAGTTTTATGTTGCAGAGATCCTTCTGGCCATGGAATACCTGCATATGCTTGGAATAGTGTATCGTGATCTAAAGCCTGAAAATGTTCTTGTTAGAGAAGATGGTCACATTATGCTTTCTGACTTTGATCTTTCTCTTCGGTGCTCAGTCAACCCAACAATGGTGAATTCATCGTCTTTAGACAACGATCCGCTGCGAAAGAACTCTAACTATTGCATCCAACCCGCATGCATCGAGCCACCTTCATGTATTGAACCATCATGTGTGGTTCCAACATCTTGTTTCTCTCCAAGATTCTTTAAATCCAAGAAAGACAAGAAAGACAAGAAACCCAAGTCTGAAATCTGCAACCAAGTGAGTCCGTTGCCTGAGCTTATGGCCGAGCCGACTGGGGTCCGGTCAATGTCATTTGTTGGGACCCACGAGTATTTAGCACCCGAGATAATTAAAAACGAAGGGCATGGTAGCGCAGTGGATTGGTGGACACTTGGGATCTTCTTGTACGAGCTGCTTTTCGGTAAAACTCCATTTAAAGGCTCATGTAATCGGGCTACATTGACGAATGTTGTTGGGCAACCGTTGAGGTTCCCCGAGTCACCGGTGGTGAGTTTTCCTGCCCGGGATCTAATAATGGGTCTGCTAGTGAAAGAACCGCGGAACCGGCTGGCATACAAGAGAGGAGCTACTGAGATCAAACAACATCCGTTCTTCGAAGGTGTTAATTGGGCTTTGATCCGTTGTGCAAGCCCGCCCGAAATCCCAAAACCGGTAGCGCTTGCTTCTCCGACGACGTCTGTTTTGGAGAAGAAGACTGGTGGACTCATGGTGGTTGGACCGGAGAAGAAGGGGTCACAAAACTACCTGCAGTTTGATTTCTTTTGA | 1476 | 44.65 | MGSVKETKPTEHVAFKDQSRPIAQNGSVSKSTEKTDFTESGKSSLCRGSTSTDLSDESSYSILSSNISKPHKSNDSRWEAIQTVRSKDGVLGLNHFRLLKRLGCGDIGSVYLCELSGMKSYFAMKVMDKVSLEGRNKLSRAETEREILQSLDHPFLPTLYTHFETDKYSCLVMEFCPGGDLHILRQRQPAKRFCEQAVKFYVAEILLAMEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCSVNPTMVNSSSLDNDPLRKNSNYCIQPACIEPPSCIEPSCVVPTSCFSPRFFKSKKDKKDKKPKSEICNQVSPLPELMAEPTGVRSMSFVGTHEYLAPEIIKNEGHGSAVDWWTLGIFLYELLFGKTPFKGSCNRATLTNVVGQPLRFPESPVVSFPARDLIMGLLVKEPRNRLAYKRGATEIKQHPFFEGVNWALIRCASPPEIPKPVALASPTTSVLEKKTGGLMVVGPEKKGSQNYLQFDFF | 491 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00908 | 491 | FunFam | serine-threonine-protein kinase D6PK-like | 180 | 247 | - | - | |
| Mimi17g00908 | 491 | SMART | serkin-6 | 96 | 435 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mimi17g00908 | 491 | Gene3D | Transferase(Phosphotransferase) domain 1 | 176 | 245 | - | - | |
| Mimi17g00908 | 491 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 464 | IPR011009 | - | |
| Mimi17g00908 | 491 | FunFam | Serine-threonine-protein kinase D6PK-like | 94 | 179 | - | - | |
| Mimi17g00908 | 491 | Gene3D | Phosphorylase Kinase; domain 1 | 94 | 175 | - | - | |
| Mimi17g00908 | 491 | Pfam | Protein kinase domain | 332 | 435 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mimi17g00908 | 491 | Pfam | Protein kinase domain | 97 | 248 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mimi17g00908 | 491 | ProSitePatterns | Serine-Threonine protein kinases active-site signature. | 217 | 229 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Mimi17g00908 | 491 | PANTHER | FLIPPASE KINASE 1-RELATED | 29 | 458 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
| Mimi17g00908 | 491 | MobiDBLite | consensus disorder prediction | 20 | 57 | - | - | |
| Mimi17g00908 | 491 | ProSiteProfiles | Protein kinase domain profile. | 96 | 435 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mimi17g00908 | 491 | CDD | STKc-phototropin-like | 95 | 454 | - | - | |
| Mimi17g00908 | 491 | Gene3D | Transferase(Phosphotransferase) domain 1 | 331 | 453 | - | - | |
| Mimi17g00908 | 491 | FunFam | serine-threonine-protein kinase D6PK-like | 330 | 453 | - | - | |
| Mimi17g00908 | 491 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00908 | K08286 | protein-serine/threonine kinase [EC:2.7.11.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:50808335 | Mimi4g00148 | Mimi-Chr4:3362832 | dispersed | |
| Mimi | Mimi-Chr3:12758819 | Mimi17g00908 | Mimi-Chr17:50808335 | transposed | |
| Mimi | Mimi-Chr13:108841889 | Mimi17g00908 | Mimi-Chr17:50808335 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Mimi19g00532 | . | 4 | 59 | AGC Kinase gene family | AT3G10540 | 57.895 | 5.06e-16 | 68.9 | |
| Mimi19g00533 | . | 63 | 287 | AGC Kinase gene family | AT5G04510 | 86.222 | 5.04e-146 | 415.0 | |
| Mimi19g00900 | . | 363 | 436 | AGC Kinase gene family | AT5G09890 | 43.21 | 2.07e-12 | 63.2 | |
| Mimi19g01096 | . | 463 | 588 | AGC Kinase gene family | AT3G45780 | 47.619 | 8.31e-35 | 134.0 | |
| Mimi19g01196 | . | 207 | 525 | AGC Kinase gene family | AT2G26700 | 55.692 | 4.22e-113 | 334.0 | |
| Mimi19g01200 | . | 12 | 469 | AGC Kinase gene family | AT2G26700 | 58.085 | 2.85e-180 | 511.0 | |
| Mimi18g00847 | . | 4 | 486 | AGC Kinase gene family | AT3G10540 | 75.869 | 0.0 | 772.0 | |
| Mimi18g00863 | . | 4 | 486 | AGC Kinase gene family | AT3G10540 | 75.665 | 0.0 | 770.0 | |
| Mimi18g00998 | . | 72 | 1107 | AGC Kinase gene family | AT5G62310 | 59.605 | 0.0 | 1171.0 | |
| Mimi18g01484 | . | 72 | 1098 | AGC Kinase gene family | AT5G62310 | 58.634 | 0.0 | 1133.0 | |
| Mimi17g00387 | . | 1 | 430 | AGC Kinase gene family | AT1G53700 | 61.486 | 0.0 | 513.0 | |
| Mimi17g00908 | . | 98 | 586 | AGC Kinase gene family | AT5G47750 | 73.333 | 0.0 | 736.0 | |
| Mimi17g02148 | . | 5 | 421 | AGC Kinase gene family | AT3G25250 | 56.047 | 5.76e-161 | 457.0 | |
| Mimi17g02579 | . | 19 | 438 | AGC Kinase gene family | AT2G34650 | 62.642 | 0.0 | 527.0 | |
| Mimi17g02888 | . | 129 | 169 | AGC Kinase gene family | AT5G58140 | 52.273 | 3.52e-06 | 45.1 | |
| Mimi16g00320 | . | 1 | 996 | AGC Kinase gene family | AT3G45780 | 68.138 | 0.0 | 1360.0 | |
| Mimi16g01527 | . | 381 | 934 | AGC Kinase gene family | AT3G52890 | 60.791 | 0.0 | 650.0 | |
| Mimi16g02063 | . | 1 | 468 | AGC Kinase gene family | AT3G08720 | 67.021 | 0.0 | 645.0 | |
| Mimi15g00373 | . | 54 | 910 | AGC Kinase gene family | AT5G58140 | 71.685 | 0.0 | 1276.0 | |
| Mimi14g00256 | . | 108 | 498 | AGC Kinase gene family | AT3G23310 | 84.399 | 0.0 | 722.0 | |
| Mimi14g01953 | . | 135 | 259 | AGC Kinase gene family | AT5G58140 | 40.299 | 3.02e-21 | 96.7 | |
| Mimi14g02015 | . | 135 | 259 | AGC Kinase gene family | AT5G58140 | 40.299 | 3.02e-21 | 96.7 | |
| Mimi14g02297 | . | 40 | 263 | AGC Kinase gene family | AT5G04510 | 22.594 | 2.06e-09 | 60.1 | |
| Mimi14g02406 | . | 40 | 263 | AGC Kinase gene family | AT5G04510 | 22.594 | 2.43e-09 | 59.7 | |
| Mimi13g00109 | . | 14 | 391 | AGC Kinase gene family | AT1G51170 | 54.974 | 1.56e-146 | 419.0 | |
| Mimi13g00914 | . | 18 | 996 | AGC Kinase gene family | AT3G45780 | 69.066 | 0.0 | 1375.0 | |
| Mimi13g01142 | . | 129 | 373 | AGC Kinase gene family | AT3G08730 | 34.799 | 4.01e-41 | 157.0 | |
| Mimi13g01148 | . | 129 | 373 | AGC Kinase gene family | AT3G08730 | 34.799 | 2.44e-41 | 157.0 | |
| Mimi13g01436 | . | 7 | 991 | AGC Kinase gene family | AT1G45160 | 49.312 | 0.0 | 920.0 | |
| Mimi13g01856 | . | 235 | 414 | AGC Kinase gene family | AT2G44830 | 61.326 | 3.77e-56 | 206.0 | |
| Mimi13g02161 | WGDA | 411 | 455 | AGC Kinase gene family | AT5G55910 | 71.739 | 4.73e-12 | 66.2 | |
| Mimi13g02213 | . | 120 | 564 | AGC Kinase gene family | AT5G47750 | 79.176 | 0.0 | 741.0 | |
| Mimi12g00126 | . | 1 | 1268 | AGC Kinase gene family | AT3G17850 | 63.574 | 0.0 | 1492.0 | |
| Mimi11g00790 | . | 10 | 504 | AGC Kinase gene family | AT5G09890 | 76.258 | 0.0 | 811.0 | |
| Mimi11g01100 | . | 38 | 459 | AGC Kinase gene family | AT3G08720 | 57.692 | 0.0 | 513.0 | |
| Mimi10g00552 | . | 91 | 586 | AGC Kinase gene family | AT5G47750 | 81.637 | 0.0 | 820.0 | |
| Mimi9g00191 | . | 68 | 765 | AGC Kinase gene family | AT2G44830 | 63.47 | 0.0 | 834.0 | |
| Mimi9g00661 | . | 5 | 393 | AGC Kinase gene family | AT3G25250 | 57.035 | 1.77e-151 | 433.0 | |
| Mimi8g01346 | . | 16 | 404 | AGC Kinase gene family | AT1G51170 | 55.164 | 7.39e-146 | 418.0 | |
| Mimi7g00805 | . | 380 | 934 | AGC Kinase gene family | AT3G52890 | 61.221 | 0.0 | 660.0 | |
| Mimi6g00917 | . | 4 | 499 | AGC Kinase gene family | AT5G40030 | 69.941 | 0.0 | 687.0 | |
| Mimi6g00987 | . | 90 | 578 | AGC Kinase gene family | AT3G27580 | 66.667 | 0.0 | 654.0 | |
| Mimi6g01002 | . | 90 | 578 | AGC Kinase gene family | AT3G27580 | 67.066 | 0.0 | 658.0 | |
| Mimi6g01106 | . | 122 | 1164 | AGC Kinase gene family | AT5G62310 | 58.53 | 0.0 | 1186.0 | |
| Mimi6g01446 | . | 16 | 390 | AGC Kinase gene family | AT3G20830 | 55.733 | 3.82e-138 | 397.0 | |
| Mimi6g01494 | . | 16 | 385 | AGC Kinase gene family | AT1G51170 | 55.676 | 1.61e-137 | 395.0 | |
| Mimi6g01718 | . | 71 | 451 | AGC Kinase gene family | AT3G44610 | 57.18 | 5.61e-153 | 439.0 | |
| Mimi5g01442 | . | 1 | 519 | AGC Kinase gene family | AT2G20470 | 77.5 | 0.0 | 831.0 | |
| Mimi4g00148 | . | 73 | 765 | AGC Kinase gene family | AT2G44830 | 65.434 | 0.0 | 855.0 | |
| Mimi4g00321 | . | 1 | 538 | AGC Kinase gene family | AT4G14350 | 82.375 | 0.0 | 905.0 | |
| Mimi4g00338 | . | 1 | 538 | AGC Kinase gene family | AT4G14350 | 82.189 | 0.0 | 904.0 | |
| Mimi3g00704 | . | 9 | 525 | AGC Kinase gene family | AT2G26700 | 58.79 | 0.0 | 575.0 | |
| Mimi2g01018 | . | 346 | 458 | AGC Kinase gene family | AT4G26610 | 75.439 | 4.34e-52 | 169.0 | |
| Mimi1g01826 | . | 85 | 578 | AGC Kinase gene family | AT3G27580 | 66.286 | 0.0 | 654.0 | |
| Mimi1g01890 | . | 134 | 234 | AGC Kinase gene family | AT5G58140 | 43.636 | 6.65e-21 | 95.9 | |
| Mimi1g02783 | . | 3 | 451 | AGC Kinase gene family | AT3G44610 | 62.876 | 0.0 | 553.0 | |
| Mimi1g02784 | . | 467 | 896 | AGC Kinase gene family | AT3G52890 | 64.501 | 0.0 | 569.0 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Mimi | Pkinase | 2.8e-36 | CL0016 | PK | AGC_RSK-2 |