AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00911 ATGACCGGCGGCGAGTGCGACACTAGGGTTCCGGCACCGATTCCGACCAGCGTTCGGAAGGTGATTCAAGAACTAATGAGGAACCTACGATACAAGCACAGTGATGAGCTCGTTTACACAACCCTCAAAGATTCATGTATGGATCCGACCGAAGCTGGCCGGAGGTTGAAGATGATTCTCGATATACGAGAAATCGCAGGAAAGCACAGCGTTGAAGATGTGTATACAATGCTTAAAGAGTGCAATCTGGATGCTAATGAAGCTGCTCAGAGGCTATTGTATATTGATACTTTCCATGAGGTCAAAAAGAAACATGACCGGAGAAAAATTATAATCAGTGATGCTTCTCAAGAGAATAAACAGACACGGGTTAATCAATGGAGGGGAGACAAAGGCGGGCGAGGGACTTTCTACTTATCAAAAGTTTTTGAAGATGTTGGAGGTGGGAGGAATTTGGGTTCAAGAAAGGAATATGGGACTACTGATAGCCTACCAAGGGTTTTGAGGCCAACCATGCCAGATCATACAGGAAAAGAAAACAATGTAGTACATGTGCCAAATTCTTGTGACAACATGAATGGTACACCGGCTTTATCCAATGGTAGTTACAATCATAAGCTTGCACCCGAACTATCTGCAGATGGCACATCCTCTACTGCAGATCATGTTGTGGTTTCATCTAAGAACACCAAGCACATTTGTTCCGTTGGTACAATTAAATGTGAGATTGTAAAACAAAGTTGTTCTGATGATTCAAATGCAAGGGTTCCTGCTGGCATGAAGTTTGGTGCTGATCAGTTTGGTACTGATCAGTTTGGTACTAGAACCATTCCAGTCATTGCAATAGCTGCAGATTCTGACCCAAAGTCTAATGTAGCTGAAAATAATCAGATTACAGAGTCTTTGCATCCTGTATTGTTGTCAAACCAAAACAGTTCACAGACTGTCAATCCTATTCAGGATAATCTGCAGCCTTCTCAATCATTAAACGAGCCTCTAAAAGCTAATGACTCCGAGCACACAGATCCGGATCCTGAGGAAGAATCTGATTTGAATATATCAACTCCCAAACTTGATGCAATGATAGAGAAATTGACTTTATCTTCCCACCAAGCTGTAATTTTCCCTAATCATCTACAAATTCCTGAAAATTATAAATGCCAGTTTGTATTTGGAAGTTTGGATACTACTCTTGATGATTGCAAACCAAAATCCTCGACTGAATCTTCTCAGCAAAATGAAATTGTAAAAGAACCTTCTATGAGCAATGAAATTGTTTCCGTAACAGCTCAGGAAGGTAAAATTCAAGATCATTCTTCTGAAGATATATTGCCTTTAGAAGATAACATCTTATCCGATTCTTCTGCTCTAAATCACGAGCAGACAAAGGTGGAGTTAGTCCCCCTTCCCCCTTCAACAGGATTTCAGAATCTTCCAGTTCTTCAAACTGTTAGGGACTACAGTTATGGTTATGTGCCACCTGTGATGGGCACACATTTTGTACAACTTGATATACCGGAGCTACAGAATGGGGCCTCTCCAGTTGTATCTGCAGTGGGACAATCTCCTGTAACACAGCCTGCAATTGTGGGCCAGAGTTCTATAGCATCATCTCCACCTCTGTTTCCGTATTTCAGACCATATCCAAACTACATTCCTTATAACCCATATTTCCCACATATGTATTTGCCACTAAGTGCTCACTTGTTGAACCATGGTGTATTCCCTCCACCACCACCTACTACAACCAATGTCCAGCATATGCAGGCGGCAGCAGCGGTGGCGGTGAAATCACTTACTTCACAAAATAAACAAGGAAATAATGAAGATATTACCACATCCGAAGAAAAAATTAACAGTATATCAACGGTTCAACAGGGTGAAGATCAACAAGCCTGGGCTGGTGCACCCGTCCATGATATACCCAATCTATTACCAAACTATTTCTATAACTTCCCTCACGGACAACTTATGCCCACCTTTTCACCATTACAAGCTGCAGCCCTTTATCATTCATCTCAAACATTAACTGCTCAATCTACCATACAACCGTCACTCATTTATCAACCACAGCTCACAGGCGGCACGGTTGAACCTATGGTGCAACAATTAACCTCTTACAATCAACATTTGTATTCTTCACCGGTAAACCAGACCGACACTGCATTATTGAACACAGGGACAGGTTGA 2190 41.87 MTGGECDTRVPAPIPTSVRKVIQELMRNLRYKHSDELVYTTLKDSCMDPTEAGRRLKMILDIREIAGKHSVEDVYTMLKECNLDANEAAQRLLYIDTFHEVKKKHDRRKIIISDASQENKQTRVNQWRGDKGGRGTFYLSKVFEDVGGGRNLGSRKEYGTTDSLPRVLRPTMPDHTGKENNVVHVPNSCDNMNGTPALSNGSYNHKLAPELSADGTSSTADHVVVSSKNTKHICSVGTIKCEIVKQSCSDDSNARVPAGMKFGADQFGTDQFGTRTIPVIAIAADSDPKSNVAENNQITESLHPVLLSNQNSSQTVNPIQDNLQPSQSLNEPLKANDSEHTDPDPEEESDLNISTPKLDAMIEKLTLSSHQAVIFPNHLQIPENYKCQFVFGSLDTTLDDCKPKSSTESSQQNEIVKEPSMSNEIVSVTAQEGKIQDHSSEDILPLEDNILSDSSALNHEQTKVELVPLPPSTGFQNLPVLQTVRDYSYGYVPPVMGTHFVQLDIPELQNGASPVVSAVGQSPVTQPAIVGQSSIASSPPLFPYFRPYPNYIPYNPYFPHMYLPLSAHLLNHGVFPPPPPTTTNVQHMQAAAAVAVKSLTSQNKQGNNEDITTSEEKINSISTVQQGEDQQAWAGAPVHDIPNLLPNYFYNFPHGQLMPTFSPLQAAALYHSSQTLTAQSTIQPSLIYQPQLTGGTVEPMVQQLTSYNQHLYSSPVNQTDTALLNTGTG 729
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00911 729 MobiDBLite consensus disorder prediction 312 334 - -
Mimi17g00911 729 SUPERFAMILY UBA-like 57 109 IPR009060 GO:0005515(InterPro)
Mimi17g00911 729 PANTHER FLOCCULATION PROTEIN (DUF1296) 509 608 IPR044277 GO:0051082(PANTHER)
Mimi17g00911 729 MobiDBLite consensus disorder prediction 312 354 - -
Mimi17g00911 729 Pfam GBF-interacting protein 1 N-terminal 57 109 IPR009719 -
Mimi17g00911 729 MobiDBLite consensus disorder prediction 153 179 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00911 - -