AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00913 ATGGAGCTGGTGCCATATTCCGATCCTAACACCTCCTCCGTCTCACCGCCGTGGCAAGACATGTTCCGGTCAGCCTCCACCCGCAAACCAGAACCACCTCCCCAGCCTCAACCTCAACCTCAGCCCCCACCCCCACCCCAACCTACCACCGATCCCGATCAGACCGAACCATCTTCTCTATCTGGAGACCCTCAGGTACGCCTCGCACTCTACATAGCCATGGCACACGCCGGCTTAGCTTTTGCGATCTTCGTTCTTTACGGTGTTTCCAGATTACTCGAAGAGTACCTCCGCCCAATTCTCTGGGCTGTTCTTTGTTCAATCCCTCTTCGAGGAATTCAGCAAACCCTAGTTGCGTTCTGGGATGAACCCTTGAGATTAGGGCTTACAGAAACTGTAATTGCTGTACCAGTATCTGTTTATAGGGTGTTCATGGGGACCATTGTTGAGATCAGAGACTTGGGGGTTAGAATAGTTCGTCTGAAGAAGAAAAATCCGGATTCGGATTCTGTGAAGCGAAAACAGTCTGGGTTTTTGATTCTGTTAAGATGGTTGGTGTCGTTTTGGGTGTTTGTAATGGTGTATGAACAGTTTGGTGTTCTTGGTGCTGTTGTTCTGTTAGGGTTAGGGTTTCTGTTTACTTCCAGCAATGTGAAGTCTACCATGTCTGCTGTTTCTTCGTTTCACGGGTCGCGTATGCTACAAAGTAATCGTCATACCGCGTTCCTGACTAAAGGGATTTTGAAAAGATTGCAAACAATTGTTGCCTTTGGGTTGATTTTTGGTATGATTGTGGGTTCTGTTGCTGGGATTATGTTTTTTTCTTACAAGATTGGAGTTGAAGGTAAGAATGTTGTTTATTCAATCAAATCACATGTTGAAGAGAATAATTATACAGAAAAGATAGGATTAAGGCAATGGATGGATGATAATGATTTTCCAGGAATGGTGGATAGATACACAACCCAGTTTTATGTAACTGCAAATGAACAGATTGATAATTTGGCTGTGCAGTACAACGTGATGGAAATCGTTCAAGAAATGAAACAGTTGGTTGCACCATGGTTAAACCCTGCAAATTCTTTTGCACCTTCTACCGCGTTAGCAACCCCAAGCGTGTACACTGAAAAGATACTAAGTTTGAAAAGGATGGTTACTAATCGTGAATGGTCAGCAATTTATCCAGAAGTTAATGCGATGTTAAACGAAGCACGTATCAGCAAAGAGGACATGATGGAAAGAGCAAAAGCAATTGCTTTTCAAGGAAAAGATGTTGTTCAACGTGTGCTCGCAAGTAGTAAATCGATTGTGGGTGGTGGGACTAAGCTTATTTTCATAGTATTTGAGTCAATTGTTTCTGGGGCTGCTGGTTTTTTGAATTTTATCTCGCAGTCGATGGTTTTCGTATGGGTTTTATACTCGTTAATAACATCAGAGTCTGGTGGTGTTACAGAACAAGTTATGCATATGATTCCGATTTCAAGATCCACTAGAATGCGGTGTGTTGAGGTTCTCGATAAAGCTATTTCTGGTGTTCTTTTGGCTACTGCAGAGATTGCATTTTTTCAAGGGTGTCTCACATGGCTTTTGTTTAGATTATTCAACATTCATTTCTTGTATATGTCAACGTTGCTTGCGTTTGTTAACCCTTTACTGCCTATATTTCCATATTTTGTTTCAACCATCCCAGCAGCATTGCAGCTGATACTGGAAGGGAGATATATAGTTTCCATTTGTTTGTCAATTATTCATCTTGTCCTTTTGGATTATGGCTCTACTGAAATTCAAGAGGATATACCTGGTCACAGCGCGTATCTTACAGGGCTTAGCATCATTGGTGGAGTAGCATTGTTCCCGTCTGCTTTGGAGGGAGCAATATTGGGGCCATTGATAACAACGGTTATCATTGCTCTCAAGAACTTGTATGTAGAATATGTTTTGGATGAACCAGAAGAAGAGAAAAAAGAGTGA 1971 42.26 MELVPYSDPNTSSVSPPWQDMFRSASTRKPEPPPQPQPQPQPPPPPQPTTDPDQTEPSSLSGDPQVRLALYIAMAHAGLAFAIFVLYGVSRLLEEYLRPILWAVLCSIPLRGIQQTLVAFWDEPLRLGLTETVIAVPVSVYRVFMGTIVEIRDLGVRIVRLKKKNPDSDSVKRKQSGFLILLRWLVSFWVFVMVYEQFGVLGAVVLLGLGFLFTSSNVKSTMSAVSSFHGSRMLQSNRHTAFLTKGILKRLQTIVAFGLIFGMIVGSVAGIMFFSYKIGVEGKNVVYSIKSHVEENNYTEKIGLRQWMDDNDFPGMVDRYTTQFYVTANEQIDNLAVQYNVMEIVQEMKQLVAPWLNPANSFAPSTALATPSVYTEKILSLKRMVTNREWSAIYPEVNAMLNEARISKEDMMERAKAIAFQGKDVVQRVLASSKSIVGGGTKLIFIVFESIVSGAAGFLNFISQSMVFVWVLYSLITSESGGVTEQVMHMIPISRSTRMRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLFNIHFLYMSTLLAFVNPLLPIFPYFVSTIPAALQLILEGRYIVSICLSIIHLVLLDYGSTEIQEDIPGHSAYLTGLSIIGGVALFPSALEGAILGPLITTVIIALKNLYVEYVLDEPEEEKKE 656
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00913 656 MobiDBLite consensus disorder prediction 29 52 - -
Mimi17g00913 656 PANTHER TRANSMEMBRANE PROTEIN 21 654 IPR002549 -
Mimi17g00913 656 MobiDBLite consensus disorder prediction 1 22 - -
Mimi17g00913 656 MobiDBLite consensus disorder prediction 1 62 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00913 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
129108 Mimi13g02212 Mimi17g00913
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr13:108822575 Mimi17g00913 Mimi-Chr17:50912684 wgd
Mimi Mimi-Chr17:50912684 Mimi4g01011 Mimi-Chr4:19011421 wgd