AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00920 ATGGCGATTTTCGCGGGAAAATTCATATACAGCAAAGCATTCGACCTTCAGTCACGAGCGTTCTTGAAGCCTTGGGGGAAAACGAAAATTATAGTCAGATGCTGTTCGAATTTTGGGGAAGGCTCTACGGATTTCCCAGTTAGGTACACACCGAAGAGATCTTCGAATGCTAAGAAGCCAAAGTTACCTGATGATCTTACTCCGATTCCGAAGAAATCCGACAATTTCGAATTGCGTCGATATGCAAATGATGATTTGTCGAATGTTGAATTTTCGAATGATTGGGAGAGGTCCAGGATAGGATTATCTTTGGACAAAAAATCACCCGGTTTTAAATCAGGTAATTTAAGATCAAAAGAAAAGAAAATTTGTAATTCAGCTGTGAGATCAGAGGTGATTGAACATAATTATAAGTGGGGATCTGCAGAATCAAATTCCGTTGAAGAACTTCATGAATTTGATGCAATGGATGATCCGAATAATGCGTTAGATGAAGTTGACTTTCATAATGGTGAATATGAAATCAAACATTTACCACTTGAATCTAGAAAAAGTAATGAAGAAGCTGAGAAGACGGCAATTGGATTGCTTGCAGCAAGAGCATATACAGCACTTGAGCTGAAGAAGAAACTGTCTGGAAAGAAATTCTCTCCTGAAGTCGTCAATTCTGTGATCTCCGACTTCCAGAACAGGGGTTTGATCAATGATTTCTTGTATGCGGAAGCGTTTTCTCGGTCAAGATGGTCTTCATCAAGTTGGGGTCCACGTAGAATCAAGCAAGCCCTGGCCAAAAAGGGTATCAATGATGCTGATGCACAGAAAGCAATAAAACTGGTTCTAGAAGACGGTGAACCCGATGACAATGTTCAAGTTTCAAGATTTGGATTATCAAAACCCTCAATCGACCATCTATTCACACAAGCATTAAAGCAATGGATTCGTGCTAAAAATCTCCCAAGTGAAAAGCAGAAATCAAGGATCATCACATGGCTTCAATACCGTGGCTTTAATTGGGGAATTATTAACTTCATCTTGAAAAAGTTACAGTCCGAGCATCCACCTTAA 1065 39.62 MAIFAGKFIYSKAFDLQSRAFLKPWGKTKIIVRCCSNFGEGSTDFPVRYTPKRSSNAKKPKLPDDLTPIPKKSDNFELRRYANDDLSNVEFSNDWERSRIGLSLDKKSPGFKSGNLRSKEKKICNSAVRSEVIEHNYKWGSAESNSVEELHEFDAMDDPNNALDEVDFHNGEYEIKHLPLESRKSNEEAEKTAIGLLAARAYTALELKKKLSGKKFSPEVVNSVISDFQNRGLINDFLYAEAFSRSRWSSSSWGPRRIKQALAKKGINDADAQKAIKLVLEDGEPDDNVQVSRFGLSKPSIDHLFTQALKQWIRAKNLPSEKQKSRIITWLQYRGFNWGIINFILKKLQSEHPP 354
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00920 354 Gene3D - 235 278 IPR036388 -
Mimi17g00920 354 Gene3D - 188 233 IPR036388 -
Mimi17g00920 354 Pfam RecX, third three-helix domain 302 345 IPR053925 -
Mimi17g00920 354 Pfam RecX, first three-helix domain 192 226 IPR053926 -
Mimi17g00920 354 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 14 353 IPR003783 GO:0006282(InterPro)
Mimi17g00920 354 Hamap Regulatory protein RecX [recX]. 171 352 IPR003783 GO:0006282(InterPro)
Mimi17g00920 354 Gene3D - 299 353 IPR036388 -
Mimi17g00920 354 MobiDBLite consensus disorder prediction 50 69 - -
Mimi17g00920 354 Pfam RecX, second three-helix domain 235 275 IPR053924 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00920 K03565 regulatory protein