AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi18g00277 | ATGCGGAAGGTGTATGATGTGTCATCATATCTTGAAGAACACCCAGGTGGTTATGATGTCCTCCTACAGGTTACAGGAAAAGATGCCACAGATGAATTTGAAGACGCTGGTCATAGCAAGACTCCTCGGGAACTTATGGAGACGTTCTGCGTGGGGGAGTTGGATACGTCAAACATCCCTCGACTTGAAGTTGTGTCCGAAGAACATAGGAATTACATCCCTGAAAAGCTGCTTGACATGAGCAAACAATACTGGGCGGCTCCGGTGGCGGCTGTCGGCTTATCGCGGCTGCCCAAGCGACGCCCTGCTTCTCCGCCTCCCTGCGGCTGCGCCCCTGCACGACTCACCTCCTTCGGAAAATGGAAATCTCCCCTCTGCAGCCGATTTAGCCTCCTGGACGCTGGACCATCTGTAGGAAAAGGGATGGAGAAGGTAGATAAAGGTGAAGTTCCTGAAGCCGTAAAAGATGCTATGTTTATAAAACTTCCTCTATTTTCTTTTGCTCAACTATTTAGAGGAGACGTTAAACAAAAACTTGAGGATTTAAGAAATTTAGTTAAAGGGTTTGTGCAAAGAGGGGTTATACTTTACATAGGGGATCTTAAGTGGATTGTTGAGTTTAGGACTACTTCTTTGAGTCATGGAAGGGGATACCATTATTGA | 663 | 46.76 | MRKVYDVSSYLEEHPGGYDVLLQVTGKDATDEFEDAGHSKTPRELMETFCVGELDTSNIPRLEVVSEEHRNYIPEKLLDMSKQYWAAPVAAVGLSRLPKRRPASPPPCGCAPARLTSFGKWKSPLCSRFSLLDAGPSVGKGMEKVDKGEVPEAVKDAMFIKLPLFSFAQLFRGDVKQKLEDLRNLVKGFVQRGVILYIGDLKWIVEFRTTSLSHGRGYHY | 220 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi18g00277 | 220 | PRINTS | Cytochrome B5 signature | 42 | 54 | IPR001199 | - | |
| Mimi18g00277 | 220 | PRINTS | Cytochrome B5 signature | 29 | 36 | IPR001199 | - | |
| Mimi18g00277 | 220 | PRINTS | Cytochrome B5 signature | 14 | 28 | IPR001199 | - | |
| Mimi18g00277 | 220 | PRINTS | Cytochrome B5 signature | 4 | 14 | IPR001199 | - | |
| Mimi18g00277 | 220 | SMART | Cyt-b5-2 | 2 | 55 | IPR001199 | - | |
| Mimi18g00277 | 220 | Gene3D | - | 1 | 63 | IPR036400 | - | |
| Mimi18g00277 | 220 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 1 | 55 | IPR001199 | - | |
| Mimi18g00277 | 220 | Pfam | Cytochrome b5-like Heme-Steroid binding domain | 2 | 55 | IPR001199 | - | |
| Mimi18g00277 | 220 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 10 | 17 | IPR018506 | GO:0020037(InterPro) | |
| Mimi18g00277 | 220 | PANTHER | CYTOCHROME B5 | 2 | 66 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
| Mimi18g00277 | 220 | SUPERFAMILY | Cytochrome b5-like heme-steroid binding domain | 3 | 62 | IPR036400 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi18g00277 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3984767 | Mimi | Mimi18g00277 | Mimi-Chr18:5297708 | Mimi18g00285 | Mimi-Chr18:5444286 | |
| 4001196 | Mimi | Mimi18g00277 | Mimi-Chr18:5297708 | Mimi18g00281 | Mimi-Chr18:5382770 |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Mimi19g00231 | . | 1 | 133 | NADPH P450 reductases gene family | AT5G53560 | 70.677 | 6.49e-70 | 204.0 | |
| Mimi19g00241 | . | 1 | 133 | NADPH P450 reductases gene family | AT5G53560 | 70.677 | 6.49e-70 | 204.0 | |
| Mimi19g01203 | . | 39 | 281 | NADPH P450 reductases gene family | AT5G17770 | 40.234 | 3.83e-62 | 197.0 | |
| Mimi18g00277 | . | 29 | 124 | NADPH P450 reductases gene family | AT1G26340 | 57.292 | 3.81e-33 | 114.0 | |
| Mimi18g00281 | . | 52 | 124 | NADPH P450 reductases gene family | AT1G26340 | 50.685 | 1.62e-19 | 79.0 | |
| Mimi18g00287 | . | 1 | 134 | NADPH P450 reductases gene family | AT1G26340 | 59.701 | 3.37e-57 | 175.0 | |
| Mimi17g02077 | ACH,WGDA | 30 | 281 | NADPH P450 reductases gene family | AT5G17770 | 80.556 | 1.04e-156 | 436.0 | |
| Mimi17g02179 | ACH,WGDA | 8 | 133 | NADPH P450 reductases gene family | AT2G32720 | 73.81 | 5.01e-71 | 207.0 | |
| Mimi16g02590 | . | 31 | 281 | NADPH P450 reductases gene family | AT5G17770 | 74.502 | 3.64e-133 | 399.0 | |
| Mimi12g00270 | . | 1 | 127 | NADPH P450 reductases gene family | AT5G53560 | 56.154 | 1.23e-49 | 153.0 | |
| Mimi12g00273 | . | 1 | 127 | NADPH P450 reductases gene family | AT5G53560 | 54.615 | 1.06e-47 | 148.0 | |
| Mimi12g02559 | WGDA | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 38.76 | 2.16e-48 | 171.0 | |
| Mimi11g00797 | . | 1 | 92 | NADPH P450 reductases gene family | AT5G53560 | 57.609 | 1.54e-36 | 119.0 | |
| Mimi11g00798 | . | 29 | 127 | NADPH P450 reductases gene family | AT5G53560 | 51.0 | 1.66e-31 | 106.0 | |
| Mimi9g00337 | . | 30 | 134 | NADPH P450 reductases gene family | AT5G53560 | 50.0 | 3.21e-31 | 107.0 | |
| Mimi9g00351 | WGDA | 19 | 134 | NADPH P450 reductases gene family | AT5G53560 | 47.863 | 1.61e-33 | 112.0 | |
| Mimi9g00649 | ACH,WGDA | 5 | 132 | NADPH P450 reductases gene family | AT2G32720 | 64.062 | 1.01e-60 | 181.0 | |
| Mimi9g00715 | ACH,WGDA | 30 | 281 | NADPH P450 reductases gene family | AT5G17770 | 80.556 | 2.93e-154 | 429.0 | |
| Mimi7g00551 | . | 6 | 72 | NADPH P450 reductases gene family | AT2G32720 | 37.313 | 2.19e-11 | 60.5 | |
| Mimi7g00560 | . | 3 | 59 | NADPH P450 reductases gene family | AT5G53560 | 40.351 | 5.56e-12 | 60.1 | |
| Mimi3g01426 | . | 1 | 133 | NADPH P450 reductases gene family | AT5G53560 | 71.429 | 6.08e-71 | 207.0 | |
| Mimi3g01746 | WGDA | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 37.597 | 5.22e-48 | 170.0 |