Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mimi1g01833	ATGTCAACCACCACCGGCCACCGTGATCAGAAACAGCTCATCAATCTGTTCCCACTGCACCCAGAGAATCCAGTGGAACAGGATAAGATAGATGAAGAACATAGCATGGCTCGAATCTTCTCATCTTGCGACGACGGAGCTGCCACCACTCTCACCGGAATCCTGTGTTCCGATGACGATGATGTACAAGAAGAAGAAAACACGAACAATCCATCTCCGTCGTCGGTAAACTACGCCGACGAGGAGGTCGAGCTTGTCCGGACGGCGATGAGGAGGAACAAAACCGATGGAAATCATGATAGTGAAAAATCGGTTTGTTATTCGGAGTCATCAACAACAGCTTCATGTAATCATCATCATATTCATCATCATCATCATAATAATAATAATGATCTTGATCATCATCGGAGAAAATTGGTGTTAAAGCTTGACTATGAGAAGATTATGAAGTCTTGGGTCAACAAGGGTCCGCTTTTCATTCGTGGTAATTCGGATGTGGATGCTCCACAACCACAAACCGTACCCGATCTCCAAGATGATGATATCTTTCTACACTCTTCCAATAATATGACAAGAAATGATGATCAAGAGAATGGAGGGTCGTGGATGGTTCCAGAAATTGCACATAGAGATGATGGGAGGGAGTCGAGTGCAATGGCTCATAATAGAGAAGCAAGTGTACAAAGGTACAAACACAAAAGACGCAACCGCTTATTTGCTAAAACCGTTCGTTATGAAGTTAGAAAGATTAATGCCCAGAAACGACCTCGTATTAAGGGAAGATTCGTGAAAAGCAGTTGA	801	43.45	MSTTTGHRDQKQLINLFPLHPENPVEQDKIDEEHSMARIFSSCDDGAATTLTGILCSDDDDVQEEENTNNPSPSSVNYADEEVELVRTAMRRNKTDGNHDSEKSVCYSESSTTASCNHHHIHHHHHNNNNDLDHHRRKLVLKLDYEKIMKSWVNKGPLFIRGNSDVDAPQPQTVPDLQDDDIFLHSSNNMTRNDDQENGGSWMVPEIAHRDDGRESSAMAHNREASVQRYKHKRRNRLFAKTVRYEVRKINAQKRPRIKGRFVKSS	266

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mimi1g01833	266	PANTHER	CCT MOTIF FAMILY PROTEIN, EXPRESSED	9	265	IPR052453	GO:0005634(PANTHER)\|GO:0006355(PANTHER)
	Mimi1g01833	266	ProSiteProfiles	CCT domain profile.	223	265	IPR010402	GO:0005515(InterPro)
	Mimi1g01833	266	Pfam	CCT motif	223	265	IPR010402	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mimi1g01833	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Mimi	Mimi-Chr1:89287941	Mimi1g01913	Mimi-Chr1:90924529	dispersed
	Mimi	Mimi-Chr17:91107309	Mimi1g01833	Mimi-Chr1:89287941	transposed
	Mimi	Mimi-Chr4:16553227	Mimi1g01833	Mimi-Chr1:89287941	transposed
	Mimi	Mimi-Chr1:89287941	Mimi15g01178	Mimi-Chr15:72427688	wgd
	Mimi	Mimi-Chr1:89287941	Mimi15g01209	Mimi-Chr15:72835126	wgd

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mimi19g00993	.	8	428	COL gene family	AT1G28050	41.609	1.19e-98	300.0
	Mimi17g02859	.	3	403	COL gene family	AT1G25440	44.521	4.02e-96	292.0
	Mimi15g01178	.	271	397	COL gene family	AT1G25440	33.75	4.31e-17	79.3
	Mimi15g01209	.	271	397	COL gene family	AT1G25440	33.75	4.31e-17	79.3
	Mimi15g02420	.	5	387	COL gene family	AT1G25440	45.885	3.73e-84	261.0
	Mimi3g01333	.	1	357	COL gene family	AT3G21880	39.089	8.24e-76	238.0
	Mimi1g01833	.	287	402	COL gene family	AT1G25440	37.681	3.13e-20	87.4
	Mimi1g01913	.	3	403	COL gene family	AT1G25440	43.508	5.40e-97	295.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Mimi	CCT	6.4e-18	CL0281		TR	Others