Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi1g01854 | ATGGAGGATGAATATGCAAAACTCATCAGGCGGATGAATCCACCCAGAGTTACAATCGACAACAAGTCATCCCCAGATGCAACAGTTATCCAGGTTGAAAGTGTTAATAAACATGGTATTCTGCTTGAAGTTGTGCAATTTCTTGCGGATTTAGATCTGGTCATCAAAAAAGCTTATATTTCATCAGATGGGGGATGGTTCATGGATGTGTTTAATGTTATATATCATGATGGAAGCAAAATTACAGATGAAAGGGTGGTCAGTTATATAAAAAAGGTGCTTGAAAAGGATGCTTTCTATGTACCATCATTGAATGGTTCAGTTGGGTTGAAGCCATCTGAAGATTACACAGTAATAGAATTAGTGGGAACAGACAGACCCGGATTATTATCTGAAGTGTCTGCGGTTCTAACCGCCCTCGGTTGCAATGTGGTCAATGCTGAAATATGGACCCACAACGCCCGAGCAGCAGCTGTGGTTCAAGTCACTGATAATAAAACAAAGTGTGCAGTTGAAGACCCGAAACGACTTTTGACCATCAAGAAACTTCTTTGTAACATTCTCAATGGAAACAATGATTTAAAGACTGCAAAAACAACACTTTCGCCCCCTGGTTTCATGCATCGACAGAGAAGACTGCATCAAATTATGTTTGCTGAGCGGGACTATGAAAAAATTGAAAAAACCGAACAAGAAAAGAAGAATAAATTAACAACGCGTGTTTATGTTCTAGATTGTGTTGAGAAGGATTACACGGTTGTTACTATGCATTGTAGGGATAGACCCAAGCTGCTGTTCGATATTATTTGCACTCTTACTGACATGCAATATGTAGTCTTTCATGGAGTGGTTCACACAGGGAATATGGAGGCTTTTCAGGAATATTACATCCGACATGTCGATGGAAGTCCAGTAAGCTCAGAGGCGGAGCGAGAGCGTGTTATACAATGCCTTGAAGCTGCAATTGAGCGGAGGACGTCTGAGGCGCTAGAGCTAGAACTATGCACAGCAGATCGCGTTGGACTTCTTTCGGATATAACCAGAATCTTTAGAGAAAATAGTTTGTGTATAAAAAGAGCAGAGATCTCAACTGAAGATGGAACAGCTAAAGACAAGTTTTATGTGACAGACATGACGGGTAGCAACCCTGTTGACCCGAAAACCATAGATTCGATTCGGAGGCAAATCGGCCAACAAGCAGCACTGCATGCTAGATGGAATTCTAGTCAATCATCAGACCCACAACCTGAAGAAACAACAATGGGATTTCTGTTTGGAAATCTGTTTAAATGCCGAACGTTGAAATTAGTCGGGTCCTAG | 1320 | 41.29 | MEDEYAKLIRRMNPPRVTIDNKSSPDATVIQVESVNKHGILLEVVQFLADLDLVIKKAYISSDGGWFMDVFNVIYHDGSKITDERVVSYIKKVLEKDAFYVPSLNGSVGLKPSEDYTVIELVGTDRPGLLSEVSAVLTALGCNVVNAEIWTHNARAAAVVQVTDNKTKCAVEDPKRLLTIKKLLCNILNGNNDLKTAKTTLSPPGFMHRQRRLHQIMFAERDYEKIEKTEQEKKNKLTTRVYVLDCVEKDYTVVTMHCRDRPKLLFDIICTLTDMQYVVFHGVVHTGNMEAFQEYYIRHVDGSPVSSEAERERVIQCLEAAIERRTSEALELELCTADRVGLLSDITRIFRENSLCIKRAEISTEDGTAKDKFYVTDMTGSNPVDPKTIDSIRRQIGQQAALHARWNSSQSSDPQPEETTMGFLFGNLFKCRTLKLVGS | 439 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi1g01854 | 439 | SUPERFAMILY | ACT-like | 326 | 401 | IPR045865 | - | |
| Mimi1g01854 | 439 | CDD | ACT-ACR-3 | 251 | 325 | - | - | |
| Mimi1g01854 | 439 | SUPERFAMILY | ACT-like | 24 | 95 | IPR045865 | - | |
| Mimi1g01854 | 439 | Coils | Coil | 216 | 236 | - | - | |
| Mimi1g01854 | 439 | ProSiteProfiles | ACT domain profile. | 118 | 204 | IPR002912 | - | |
| Mimi1g01854 | 439 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 7 | 406 | IPR040217 | - | |
| Mimi1g01854 | 439 | Pfam | ACT domain | 117 | 154 | IPR002912 | - | |
| Mimi1g01854 | 439 | Gene3D | - | 113 | 184 | - | - | |
| Mimi1g01854 | 439 | ProSiteProfiles | ACT domain profile. | 29 | 109 | IPR002912 | - | |
| Mimi1g01854 | 439 | ProSiteProfiles | ACT domain profile. | 331 | 409 | IPR002912 | - | |
| Mimi1g01854 | 439 | SUPERFAMILY | ACT-like | 113 | 173 | IPR045865 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi1g01854 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr10:54759622 | Mimi1g01854 | Mimi-Chr1:89761848 | dispersed | |
| Mimi | Mimi-Chr12:116759465 | Mimi1g01854 | Mimi-Chr1:89761848 | dispersed | |
| Mimi | Mimi-Chr19:51338669 | Mimi1g01854 | Mimi-Chr1:89761848 | dispersed | |
| Mimi | Mimi-Chr1:89761848 | Mimi9g00035 | Mimi-Chr9:791907 | dispersed | |
| Mimi | Mimi-Chr1:89761848 | Mimi12g02619 | Mimi-Chr12:116622867 | wgd | |
| Mimi | Mimi-Chr1:89761848 | Mimi19g01001 | Mimi-Chr19:59044222 | wgd |