Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi1g01858 | ATGGCCGTCAAGACAGCGATTCAATTCTCCGATATATCGCATTTGGATCAGGTCAATGATACCCCCGCCTCATTGGCTCTGCACGCCACCCGTCTTCCAACCGGATTGGATGTGAGCAATGGGCGGAAAATTGTACCAAAATTCATGGTGGTAGGCCACCGGGGACATGGTATGAACGTCTTACAGTCAACGGATAAGAGAATGAAAACTTATAAAGAGAATTCAATTCTTTCATTCAATAACGCTGCTAATCACCCGCTTGATTTCATTGAATTTGATGTTCAGGTGACAAAAGACAATACACCAGTTATTTTCCATGATGATTTCATCCTCTCCGAAGAGAATGGTAACATAGTTGAGAAAAGAATCACCGAGTTGACTTTGGATGAGTTCTTTAGTTATGGTCCTCAAAGAGAAACCGGTCAGACGGGCAAAACTTTGATGAGAAAATCAAATGGAAAGATCGTCGGGTGGGATGTCGAGGTCGATGATCATTCGTGTACTCTTGAAGAAGCATTCCAGAAAGTAAACCCGTGTTTGGGATTCAACATCGAGTTGAAATTCGATGATTATGTAGTTTATGAACACGAGTATCTCATTCATGTTCTTCAAGTCATCTTAAAGGTGGTACATGAAAACGCCCTCGAAAGACCTATAATTTTCTCAAGCTTCCAGCCTGATGTGGCTTTGATTATGAAGAAGCTTCAGCATAAATACCCGGTGTACTTCTTGACGAATGGCGGAAACGAGATATTCACCGACGTGAGAATGAACTCGTTAGAAGAGGCGAAGAAGCACGCGATATCGGGCGGTTTGGATGGAGTTGTTTCAGAAGTAAGGGGTGTATTTAGAAACCCATCAGTAGTTAGGGAGATTAAAGAATCAAATCTCTCCCTCCTTACTTATGGCAAATTAAATAACATCCCAGAAGCCGTACATGTTCAATATCTCATGGGCATAGAGGGTGTAATTGTGGATTTAGTACAAGAAATCACAAGTGCAGTTGAAGTTTTAAAAACAGGAGTTGAAGGAGATAACACAGATAAGATTGAACTGTTGATTTCACAAGTGATTCAGCATTGA | 1083 | 41.27 | MAVKTAIQFSDISHLDQVNDTPASLALHATRLPTGLDVSNGRKIVPKFMVVGHRGHGMNVLQSTDKRMKTYKENSILSFNNAANHPLDFIEFDVQVTKDNTPVIFHDDFILSEENGNIVEKRITELTLDEFFSYGPQRETGQTGKTLMRKSNGKIVGWDVEVDDHSCTLEEAFQKVNPCLGFNIELKFDDYVVYEHEYLIHVLQVILKVVHENALERPIIFSSFQPDVALIMKKLQHKYPVYFLTNGGNEIFTDVRMNSLEEAKKHAISGGLDGVVSEVRGVFRNPSVVREIKESNLSLLTYGKLNNIPEAVHVQYLMGIEGVIVDLVQEITSAVEVLKTGVEGDNTDKIELLISQVIQH | 360 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi1g01858 | 360 | FunFam | Glycerophosphodiester phosphodiesterase GDPD2 | 39 | 337 | - | - | |
| Mimi1g01858 | 360 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 44 | 336 | IPR051578 | GO:0046475(PANTHER) | |
| Mimi1g01858 | 360 | ProSiteProfiles | GP-PDE domain profile. | 48 | 335 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mimi1g01858 | 360 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 43 | 336 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mimi1g01858 | 360 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 53 | 328 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mimi1g01858 | 360 | SUPERFAMILY | PLC-like phosphodiesterases | 46 | 329 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi1g01858 | K18696 | glycerophosphodiester phosphodiesterase [EC:3.1.4.46] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr9:7718537 | Mimi1g01858 | Mimi-Chr1:89884129 | transposed | |
| Mimi | Mimi-Chr1:89884129 | Mimi1g02757 | Mimi-Chr1:105137352 | wgd |