AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi1g01859 ATGAAATCGTTTGGGAAATTTGGGCTCAAATTGTCGACGCAGAAGAGCGATGTGAAGGAGATGAGAAGTCATCAAGCTTCTGCACATTTAGATGAGCTTGCTCAGGCTTCAAAGGACATGCAAGATATGAGAAATTGCTATGATGGATTATTATCTGCAGCTGCTGCAACTGCTAATAGTATATATGAATTTTCGGAGTCGCTAAATGAAATGGGGAACTGTTTACTGGGGACAACTACAGCAGCCACTGATGCTGAAAGTGGAAGTGTGCTATCAACTTTGGGTAATTTGCAGTTGGAACTTCAGAAAATTGCTGATACATATGAGATGAAACTTCAATGTTATGAAAAAAGAGAGGTATATGATCACATGATGGCTCAACATAGAGAGAAGGGAAAACTCAAAAATGGTAAAATTGAAAGTTCAATTACACAAAACCTGCAAGAAGCTCAAGATGAATATGATGAAGTAGCTAGACTATGTGTATTTCGGGTAAAATCACTTAAGGAAGGACAATGGCGCAGTCTTTTAACACAAGCTGCTCGCCATCACGCCGCACAGCAGTTGAATTTCTTTCGCAAAGGACTTAAGGCTGTTGAAGCAGTTGAACCTTTTATAAGAAATGTTACAGAAAAGCATCGCATTGATTGCCAACTCAGTGGATTGTCTGACCGCGGGTCCCAGGAAGGTGAAACTATAAGTGGCTATGGAAGCATTAATGATGGAGAATTGAATTTTGATTATAAACAGAAGAAACAAGGGCTTGATTATGATGGCACCTCACCAAATCCAATGGAGATAAATCCAAATAAACATAAAGGGGAGAAGCTTTTTGTTAGGCCAGCTAGAATTAGCTATTCAGCCCCCTTATACCCAGACAAAAGTAATGCACCCGGAAAGCTTAAAGAAACCCAACCCACTCCAAAATCTTACTCTTATGTACTACCTCCACCCGTTGTGGATACCCGAAATCCAATTTTAAAGCCCACCACATCTGTTTCTCATCCCAGCCTGTTTCAAAATCTGCAACCTGATAGCCCGTCAACAGCTGCCATGACCTTAAAAACCGAATCAACAAAGCCATCCATCCAGTTACCCGCTCCATCTAATGGAAGATTTTCATTCTCACAACAGGATAGTTATCACAGAACCGATGGTAGTAAAGCAGACGCACGACAATCTTACTCTGGCCCATTACCACCAAGCAAGCAATTTTCTTTTAAAATTGCATCTAATAGTAGCGGGCCCATTACTTCTACTGAACTTCCTTACCCGCCTTCTCGGGTCCCTGTTTCTCCTAAAATAAGTGAACTTCATGAGCTTCCTAGACCTCCTCCTAGTAATATGGTCTTCTCTAAACCCGTTGCTGTTTCTGGTGGTTTGAGTCGGCATTCAGCACCTTTACTTTCAAAAAATCAAGAAATTTCTCCACCTAATAAACAGGCTATGCCAACATCAACTTGTGCATCACCTCTTCCGCTTCCGCCTGTCGTGAAAATCAACTCGAGTAACAGAGAGAGATGA 1524 41.4 MKSFGKFGLKLSTQKSDVKEMRSHQASAHLDELAQASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGNCLLGTTTAATDAESGSVLSTLGNLQLELQKIADTYEMKLQCYEKREVYDHMMAQHREKGKLKNGKIESSITQNLQEAQDEYDEVARLCVFRVKSLKEGQWRSLLTQAARHHAAQQLNFFRKGLKAVEAVEPFIRNVTEKHRIDCQLSGLSDRGSQEGETISGYGSINDGELNFDYKQKKQGLDYDGTSPNPMEINPNKHKGEKLFVRPARISYSAPLYPDKSNAPGKLKETQPTPKSYSYVLPPPVVDTRNPILKPTTSVSHPSLFQNLQPDSPSTAAMTLKTESTKPSIQLPAPSNGRFSFSQQDSYHRTDGSKADARQSYSGPLPPSKQFSFKIASNSSGPITSTELPYPPSRVPVSPKISELHELPRPPPSNMVFSKPVAVSGGLSRHSAPLLSKNQEISPPNKQAMPTSTCASPLPLPPVVKINSSNRER 507
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi1g01859 507 Gene3D Arfaptin homology (AH) domain-BAR domain 102 214 IPR027267 -
Mimi1g01859 507 MobiDBLite consensus disorder prediction 471 488 - -
Mimi1g01859 507 MobiDBLite consensus disorder prediction 325 382 - -
Mimi1g01859 507 CDD BAR 39 204 - -
Mimi1g01859 507 MobiDBLite consensus disorder prediction 471 507 - -
Mimi1g01859 507 MobiDBLite consensus disorder prediction 288 404 - -
Mimi1g01859 507 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 109 498 IPR037488 -
Mimi1g01859 507 SUPERFAMILY BAR-IMD domain-like 31 207 IPR027267 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi1g01859 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr1:89891797 Mimi1g02756 Mimi-Chr1:105123263 wgd
Mimi Mimi-Chr1:89891797 Mimi12g02612 Mimi-Chr12:116366059 wgd