AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi1g01860 ATGGGCTGTGCAATTTCTGTCTACAGAGCCGGAGGAAACAAGAAGCAGATGAAGATCCCAGTCGTCACCGTTTTCGTACCTTCAATTCGTGTTCCGATTAACTCCAGTTTTCAGAAACATCTTAAAGGCGTCGTTCCGAAGGATCTTACGGATCGTCTCACCTCGTTTAGGAATCAAATTGGTCTTCTCGCACAACAAACTGATGCTTCAGCTGCTCCTGAATTGCTACGTGCATTAGAAGAATACTTATCGCTGTTAGTTGGCCTCACTGATCAAGAACTTGGTTTTCAGGAGTTGATTGAATTTAAATGGAAAAGTTTAGATGATGGATTACAAGAAATAAGTGTTGCTGATTCCTGGTTTGAATTACTATCTGTTGTTCATATGATGGCTATGCTGACATTAATGGAGGCAAATTCAAAGTTGATTCCTTACCAAACTGTTTCTAATGAAACAGTTGAATCTACAGATAGCGTGCGGTGTGCTGTTGAATTATTAGTGAAGGCAGCAGGGTACCTGCAATTCTGTCTTCATGAAATTCTTGTCCGAATTCCACCTCATATCAAGATGAAGCTGCCTGTAGATTTGCAGGAGAAGGTACTTGAGGCTGCTTATATTCAAGCACTAGGGCAGGGAACAGAAATGCAGCTTGCTTCAGCTGTTCAAAGTAAAAACGCCACTTTATCTGTTAAAAGAAGACTAGCATGCGAGCAATTAAGTTTTTTCAGCCAGGCCCACTATTCCTTGTCAACATGTGACAACCTTAACGGATATGGAAAGAAACATCTTTCATTTATCAAATGGAAGTACCTTGAAGCAAAGGCTGCAGCGTACTACTATCATGGTATAATCACAGACAAGGGCAGTGAACCATCCTGTCACATCAGTGCAGTGTGTTGTTTTCTTGCTGCTGAAGAAATTCTAACCGAGAGCAAGAAGGCCTGCTTAAACTTTTGCTTAACGGCTCCCGTGACAAGGGCTCCAACTGCATGGGGTGCTATGAAACACTTGAACAAGAAAATTCCTGAAACTGCAGCTAAAAAGTCTCAAATGTATGCCTACCTTTTAGAGCAAGAAAAGAGTTTGAAAGTGTTGCCGGAACTCCCTGAATTTGAATTGTCGTTAAAAGCAGATGAATATCAAATGCCAAATAAAGATGCAGCATGGGATTGTGAAAAATGGAAAATAACTACTCAGACGCTTAAAACTCATTTTACAGATGAAGATGACAAGTAA 1236 40.7 MGCAISVYRAGGNKKQMKIPVVTVFVPSIRVPINSSFQKHLKGVVPKDLTDRLTSFRNQIGLLAQQTDASAAPELLRALEEYLSLLVGLTDQELGFQELIEFKWKSLDDGLQEISVADSWFELLSVVHMMAMLTLMEANSKLIPYQTVSNETVESTDSVRCAVELLVKAAGYLQFCLHEILVRIPPHIKMKLPVDLQEKVLEAAYIQALGQGTEMQLASAVQSKNATLSVKRRLACEQLSFFSQAHYSLSTCDNLNGYGKKHLSFIKWKYLEAKAAAYYYHGIITDKGSEPSCHISAVCCFLAAEEILTESKKACLNFCLTAPVTRAPTAWGAMKHLNKKIPETAAKKSQMYAYLLEQEKSLKVLPELPEFELSLKADEYQMPNKDAAWDCEKWKITTQTLKTHFTDEDDK 411
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi1g01860 411 Gene3D alix-aip1 like domains 33 397 IPR038499 -
Mimi1g01860 411 ProSiteProfiles BRO1 domain profile. 27 411 IPR004328 -
Mimi1g01860 411 PANTHER UNCHARACTERIZED 14 402 IPR038898 -
Mimi1g01860 411 CDD BRO1-Alix-like 11 376 - -
Mimi1g01860 411 SMART BRO1-2 23 401 IPR004328 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi1g01860 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr1:42343663 Mimi1g01860 Mimi-Chr1:89931678 dispersed
Mimi Mimi-Chr1:42590246 Mimi1g01860 Mimi-Chr1:89931678 dispersed