AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi9g01349 ATGGAGGAAGAATATTCTCTCGTTGATACCTCAAAGCTGCTACAAGCAGCTTCTGACTTCTCTTTTGATCCTGGTACTCGATCAGAAGCAGCTGTGAAGAAGTTTCTTGATTCTTTTCCCCTTCCTGTCATCATCAGTGCTTTGCAAACGAAAGGAGATGTGCCTGATTTGGAGGATACACTGATCGATTGTTTAGAGAAAATTTTTAAAACAAAATATGGGGCCTCCCTCATTCCACATTTTATGGCTTTCATTTTGGTTGGCCTGCAAGCATACTCTCAGAGAGTCAGAGCTTTGTCATGTAAAACGATCTCTAACCTTCTGGAGAAACTTGAAGATAATACCGGTTTAGCTACATCACTGGTTAAAGAGAATGACGTGTATCCACTTTTGCTTAATTGTCTCATTGATGGCGATGAACAAGTTGCGGTAGCTGCAACAGAAGCAATCAGGAATTTAGCAAGTTCTCAACAGGGGATAGAAATCATTTTCCCATCTACTCCCAATGAAACTATAGATATTCCAAAGTTAGCAGCAAGATGTTCATCACTGGGAAGAGTTCGAGTATTGGCGCTAGTAGTGAAACTATTTTCTATTTCAAGCACAACTGCATCATTAGTTTACAACTCAAATCTTTTAGGTCTATTGGAGGAAGAAGTTCGCAACATTAAGGATACACTTATATCTTTGAGTGTTTTGGAGCTCTTTTATGAGTTGGCTGAGGTTCAGCATGGACTAGAATACATTCTCCGGACCAATATTTTGCAGCTACTTATTTCCATAATCAGAAATTCTTCTGCGGAGTCGATGTTGAGATCAAGGGCTATGATGATAAGCGGCCGGCTTTTATTCAAGGACAACATTCTCACGTTTATAGATGAATCTGGTGTTAAAGCTGTGATATCAGCCATTGATGAAAGGCTTTCATTGCTAGATAGTCAAGATGTAGATGAATATGAGTGTGCTCTTGAAGCATTGGGTCAAATAGGGTCATCATCTCAAGGAGCTGCATTGATATTGTCAAATGCTTCGGCTGCTAAACATGTTGTTAATGCGGCATTTGACCTGCATGGCCGTGGCAGACAGCTGGCTGCATTGCATTCTCTTGGAAATATTGTAGGAGAAGCTCGACCTGAAAACAACAAATTATTGAATTCTGATGCTGAAGAAACTTTGGGTCGATTAATTTATGAAACCGCATCCAACACTCCCAAGCTTATACCATCGGGTCTTGTTCTTGCAATTTTTAAACTCGAGTCTGAATTTCGGATCGCGGGTTACCGATTGATAACAGGACTTTCTGCTAGACCATGGTTGCTGGTTGAGATCTGCTCAAGACAAGAGATAATAAATACAATCACAGATTCGTATACAGAAACAACTAAAATAGGTATGGAGGCTCGTTACAAGTGTTGTGAAGCAACCTACAAAGCTCTTTCTTCATCATCTAAATTTCTGAGTGATCCTGCTCTTTCTGGGACTGCAGAAAAGCTGTTGGAAGCCATTAAAAAGGGTCCTTATCTTGCGAAAGGACGAAAATACGAAGCCCGACCCGAAGTGACAACTGCAGACAGATTTTAG 1581 40.54 MEEEYSLVDTSKLLQAASDFSFDPGTRSEAAVKKFLDSFPLPVIISALQTKGDVPDLEDTLIDCLEKIFKTKYGASLIPHFMAFILVGLQAYSQRVRALSCKTISNLLEKLEDNTGLATSLVKENDVYPLLLNCLIDGDEQVAVAATEAIRNLASSQQGIEIIFPSTPNETIDIPKLAARCSSLGRVRVLALVVKLFSISSTTASLVYNSNLLGLLEEEVRNIKDTLISLSVLELFYELAEVQHGLEYILRTNILQLLISIIRNSSAESMLRSRAMMISGRLLFKDNILTFIDESGVKAVISAIDERLSLLDSQDVDEYECALEALGQIGSSSQGAALILSNASAAKHVVNAAFDLHGRGRQLAALHSLGNIVGEARPENNKLLNSDAEETLGRLIYETASNTPKLIPSGLVLAIFKLESEFRIAGYRLITGLSARPWLLVEICSRQEIINTITDSYTETTKIGMEARYKCCEATYKALSSSSKFLSDPALSGTAEKLLEAIKKGPYLAKGRKYEARPEVTTADRF 526
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi9g01349 526 Gene3D - 9 406 IPR011989 -
Mimi9g01349 526 SUPERFAMILY ARM repeat 81 396 IPR016024 -
Mimi9g01349 526 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 1 526 IPR019538 GO:0005829(PANTHER)|GO:0043248(InterPro)
Mimi9g01349 526 Pfam Proteasome non-ATPase 26S subunit 62 511 IPR019538 GO:0043248(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi9g01349 K06692 26S proteasome non-ATPase regulatory subunit 5