AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi9g01464 ATGGCGGCAATACTGGCTTCTAACAGCTGCTATTGCCGTGATGTACAATTGGTAAATCAAGTGAGAACAGCAGACAGTCTCAGCTTCTCAAGATCTGTTTCTGTCCAGAAGCTAGAGAGACATGAATGCACTTTTCCTAAAATTGAGAGGTTTCAGAGGTTACATGCTGAGATGCAGCAGACAGACTCATCCATGAAATTTGGTACCAATGGTCAACCTTCGAAGCTTGATACAAATGGTCAACCTGTGAAGTTGGGTATCAATGGTCAACCTGCAAAGTTGGTTGCTAATGGTCAACCTCCAAAGTTGGGAAGGAAAGGTCAACCAATTACCATGGTTCCCACTAGTGAGGTGGTGAATAATAGCAAGACTCTTTCCAAACAAAGAGCCAGGATGACGAATGGATCAGCACAGATTGCTAATGGAACAAGTCTTGTTAAGAGAGACATCTCAGCACCACTTGTTAAGTTTCAAAAAGTTGAACAATTTACAGGATTCCCACCTTCTGAAGAATTACGAGTCTTACCATCAGATGAAAGTTTTAGTTGGGCGAGTGATAATTATAATTCAGTACAAAGATCAATAGATGTGTGGTCTTTTGTTCTTTCTTTGCGTGTTCGTGTTCTGCTTGACAATGCAAAGTGGGCATATCCTGGTGGCTTCACAGAAGAAAAACAGAAAAACAGGAGAAGGAAAACAGCTTCATGGTTAAGAGAATGCGTGCTCCAACTTGGCCCAACTTTTATTAAACTTGGGCAGTTATCTTCAACTAGATCAGATTTATTTCCACGTGAATTTGTTGATGAACTCGCCAAATTACAGGACAGAGTACCAGCCTTTTCACCATCAAAAGCAAAAAGTTTTATTGAAAAAGAATTGGGCGCTCCAGTTAATGTACTCTTCAGGGATTTTGAAGAACGACCGATTGCCGCTGCTAGTCTTGGTCAGGTACATCGTGCAATATTACATAATGGAGAGAAAGTAGTTGTTAAAGTTCAAAGACCTGGTCTGAAGAAACTTTTCGACATCGATTTACGAAATTTAAAGCTAGTTGCAGAGTACTTTCAAAGAAGTGAAACTCTTGGTGGTCCCACACGGGACTGGATAGGTATTTATGATGAATGTTCAAAGATCTTGTATCAGGAGATTGATTATATAAACGAAGGGAAAAATGCGGATAGATTTCGTCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTTTTCTGGGATTATACTGCAACCAAGGTGCTGACATTGGAGTATGTTCCAGGCATCAAGATAAATAATATAGATGTTATAAAAGAAAAGGGTTATAGTCGATCCCAAATCTCATCCCGCGCCATTGAATCATACTTGATTCAGATACTGAAAACAGGTTTCTTTCATGCTGACCCTCATCCTGGAAATCTTGCTATTGATGTGGATGAATCACTAATCTACTATGACTTTGGTATGATGGGGGAGATTAAATCATTCACAAGGGAAAAATTGATGGATCTTTTTTATGCTGTTTATGAAAATGATGCAAAAAAGGTTATGAACAGTTTGATAAGCCTTGAAGCGCTTCAACCTACTGGAGACATGTCATCAGTAAGGAGATCTATTCAATTCTTTTTGGATAATATACTAAATCAAACACCAGATCAGGAGCAAACTTTGGCTGCAATAGGAGAGGATCTATTTTCTATAGCAACAGACCAGCCTTTCCGATTCCCGTCCACGTTCACATTTGTAATTAGGGCATTTTCCACTCTTGAAGGAATTGGCTACTCACTGGATCCAGATTTTTCATTTGTCAAGATTGCTGCACCTTACGCACAGGAGCTGTTAGATCTCAAACAACAACGGCCTAGTGGGACACAGCTTGTTGCTGAAATACGAAAACAAGCAGATGATGCAAGATCAAACACCATGTCAATGCCTTACAGAGTTCAAAGGATTGAAGAGTTTGTTAAACAACTAGAAGCAGGAGAACTTAAACTTCGTGTCAGAGTTCTCGAGTCGGAGAGAGCAGCTCGGAAGGCAACAATATTGCAAATGGCAACCATGTATACAGTTATTGGGGGCACTCTTGTAAATATAGGTGTCACATTTAGCACACAAGGCAGCCAGCTTATAGCAAATGGGTCATTTGTTGGTGCAGGTATATTCATAGCACTGCTGATTAGGTCCATGCAAAGGGTGAAAAAGCTTGATAAATTTGAAAAGATGATATGA 2226 39.98 MAAILASNSCYCRDVQLVNQVRTADSLSFSRSVSVQKLERHECTFPKIERFQRLHAEMQQTDSSMKFGTNGQPSKLDTNGQPVKLGINGQPAKLVANGQPPKLGRKGQPITMVPTSEVVNNSKTLSKQRARMTNGSAQIANGTSLVKRDISAPLVKFQKVEQFTGFPPSEELRVLPSDESFSWASDNYNSVQRSIDVWSFVLSLRVRVLLDNAKWAYPGGFTEEKQKNRRRKTASWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPSKAKSFIEKELGAPVNVLFRDFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPTRDWIGIYDECSKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNIDVIKEKGYSRSQISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTREKLMDLFYAVYENDAKKVMNSLISLEALQPTGDMSSVRRSIQFFLDNILNQTPDQEQTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRPSGTQLVAEIRKQADDARSNTMSMPYRVQRIEEFVKQLEAGELKLRVRVLESERAARKATILQMATMYTVIGGTLVNIGVTFSTQGSQLIANGSFVGAGIFIALLIRSMQRVKKLDKFEKMI 741
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi9g01464 741 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 97 673 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Mimi9g01464 741 CDD ABC1-ADCK3-like 272 519 - -
Mimi9g01464 741 Pfam ABC1 atypical kinase-like domain 272 518 IPR004147 -
Mimi9g01464 741 SUPERFAMILY Protein kinase-like (PK-like) 274 520 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi9g01464 K03688 ubiquinone biosynthesis protein
Mimi9g01464 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr14:13919727 Mimi9g01464 Mimi-Chr9:50664079 dispersed
Mimi Mimi-Chr4:15411605 Mimi9g01464 Mimi-Chr9:50664079 dispersed
Mimi Mimi-Chr5:16368859 Mimi9g01464 Mimi-Chr9:50664079 dispersed
Mimi Mimi-Chr8:7507378 Mimi9g01464 Mimi-Chr9:50664079 dispersed
Mimi Mimi-Chr8:7613997 Mimi9g01464 Mimi-Chr9:50664079 dispersed
Mimi Mimi-Chr14:13687235 Mimi9g01464 Mimi-Chr9:50664079 transposed
Mimi Mimi-Chr17:9516808 Mimi9g01464 Mimi-Chr9:50664079 transposed
Mimi Mimi-Chr18:16471021 Mimi9g01464 Mimi-Chr9:50664079 transposed
Mimi Mimi-Chr1:74549254 Mimi9g01464 Mimi-Chr9:50664079 transposed
Mimi Mimi-Chr9:3630203 Mimi9g01464 Mimi-Chr9:50664079 transposed
Mimi Mimi-Chr17:9074998 Mimi9g01464 Mimi-Chr9:50664079 wgd
Mimi Mimi-Chr6:20137746 Mimi9g01464 Mimi-Chr9:50664079 wgd