AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi9g01578 ATGGCTTCTTCTTCCACTTGCATCTTCATTTTCTATGCTCTATTGCTCTTACAGTTTTGCAGTGGTCGAGAAATCATGAATAAATTCAAAAAGATTGGTCACAACAAAGAAAATCATATAAATATCAATGGGAAAAACGATCTTTATGATTTGGATCCTGCTCTAAACGTGTTCTTCCACGTACACGATTTATATTCCGGCAAAAAAATGCCCATTTATTTTGCTGTTAACAATCCATCAACGACTCCTCGGTTATTAACGCGAGAACAATCCGATTCGATACCGTTTTCCTCCTCAAAACTTTCATATCTTCTAGAGCTTGTATCACTAGCCAAGGATTCGCCACAAGCACGAGCCATGGAGCAAACCCTCAAGCAGTGCGAGCTAGACGCTACACCGGGTGAGACCAGGTTCTGTGCTAGCTCCTTAGAGTCCATGTTGGACTCAACACGTGGCGTACTCGGTATGATCCAACTAAAGGCGTTGACCACCAATATACATAATTTGTCAAATACCCTTTTGCAAGGGTATACCTTTTTGAAGGAGCCTTTGGAGATTCATGTTTCTGATATGGTGGCTTGTCACACCATGGCTTATCCTTATGCAGTTTACTATTGCCACGGTCAGAAGGGGTATAATAGGGTTTTTGAGATATCTTTAGGGGGTGAAAATGGAAATATAGTGGATGCAATTGCTGTCTGCCACATGGACACTTCTGATTGGGATAGTGATCACGTGGCGTTTCGTGTACTCGGAGGCAAGCCTGGCAGCTCGCCGGTGTGCCATTTTCTACCAGCCGATAACATTGTTTGGATACCATCATCGTAG 828 43.0 MASSSTCIFIFYALLLLQFCSGREIMNKFKKIGHNKENHININGKNDLYDLDPALNVFFHVHDLYSGKKMPIYFAVNNPSTTPRLLTREQSDSIPFSSSKLSYLLELVSLAKDSPQARAMEQTLKQCELDATPGETRFCASSLESMLDSTRGVLGMIQLKALTTNIHNLSNTLLQGYTFLKEPLEIHVSDMVACHTMAYPYAVYYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTSDWDSDHVAFRVLGGKPGSSPVCHFLPADNIVWIPSS 275
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi9g01578 275 SMART BURP-2 56 274 IPR004873 -
Mimi9g01578 275 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 44 274 IPR044816 -
Mimi9g01578 275 Pfam BURP domain 57 272 IPR004873 -
Mimi9g01578 275 ProSiteProfiles BURP domain profile. 58 274 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi9g01578 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr14:23314429 Mimi9g01578 Mimi-Chr9:59137304 dispersed
Mimi Mimi-Chr17:5114123 Mimi9g01578 Mimi-Chr9:59137304 dispersed
Mimi Mimi-Chr17:5229721 Mimi9g01578 Mimi-Chr9:59137304 dispersed
Mimi Mimi-Chr8:41087789 Mimi9g01578 Mimi-Chr9:59137304 dispersed
Mimi Mimi-Chr9:59137304 Mimi14g01214 Mimi-Chr14:23766934 transposed