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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi9g01584 ATGGCAGCCTCCTCAGCCGTCTTATCACCGGTCACCACGGCAGCATCCGTCGTCACTCCCACCCGTGCCTCCGGCAGAACAACCACCACCAAGGTAACCTACATCAAGGGTCTCAACTCATTCGGCGGACTTAAAGCTCACACCACCGTGGCTTCCATCGGAACCCCTGTTTCCACCGACCAGCAGTTCGCAAACTTTGTTTGCTCGTTGAACAAGCCGTCGCCCCGCGGCGGCGCCGGTGGTGGTGGAGCACTCACCGCCACCTGCAATGCGGTGGGTGAGATTTTCAGGATAGCTGCAATCATGAATGGGATTACTCTTGTTGGAGTTGCAATTGGGTTTGTTCTTCTTCGGATTGAAGCATTCGTTGAAGAATCGGAGATTGCATGA 390 55.13 MAASSAVLSPVTTAASVVTPTRASGRTTTTKVTYIKGLNSFGGLKAHTTVASIGTPVSTDQQFANFVCSLNKPSPRGGAGGGGALTATCNAVGEIFRIAAIMNGITLVGVAIGFVLLRIEAFVEESEIA 129
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi9g01584 129 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 127 IPR053333 -
Mimi9g01584 129 SUPERFAMILY PetM subunit of the cytochrome b6f complex 92 124 - -
Mimi9g01584 129 Hamap Cytochrome b6-f complex subunit 7 [petM]. 91 124 IPR012595 GO:0009512(InterPro)
Mimi9g01584 129 Pfam PetM family of cytochrome b6f complex subunit 7 93 120 IPR012595 GO:0009512(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi9g01584 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
421436 Mimi17g00135 Mimi9g01584
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr17:3784398 Mimi9g01584 Mimi-Chr9:59408002 wgd