AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi9g01597 ATGGAGATACAAGTCATGACAACCTCGCCGGCGGTCAGCACCAACGCCACCCCCTACACCACCGCACCATCCACCCCTCACCGCTTCCCCCATCTCTTCTACACCGCACCCACCAGTCCCATTCACTCACTCGTCAGCTTTCCACAACACGACGACGATAACGATTTTGCATTCAATTTCACCGGAAACCCAGAACCCAATTCTATATCTGCCGCCGACGACCTCTTTCACGCCGGTAAAATCAAGCCATTAACGTCTGTCTCCGATGAACCCCCTATATCCCCTATGTGCAAGAAGAAAAACTTCGATTCGTTCACGGAAACATATAATCAAACACCTGGTGATCATCCCGAAACTACTCAAAACCCACCCAAACGAGGAAGGAAAACAACCACCAAGCCCCTAAGAATTAAACACAAAGTATCCCGATCGTCATCTCCGGTCAGAATTTCCGATATTCTCTCTGACGAAGATCCCAATCGGAAAAACTCTCTAACCTGGTACAGTAAATGGAACCTGAAGAATCTGATCCTGTTTCGAAGTGCATCAGAGGGGAGTGCGAGAAGGATCAAAGACCCAGTGATTAAATACTCAAGAATCACGAAATCCGATGAAGACGTGAAGATTTCAAGCTTCAGAAGCGTTGATAGTTGCAGGTCGGAGGTGGGGACGAGTCGGCCGGCGATGAGGACGGTGTCGGCGCATGAAATGCATTACACGGCGAACAGGGCGGTGGCGGAGGAGATGCGGCGGAAGACTTACTTGCCCTACAAGGCAGGATTGTTTGGTTGCTTGGGGTTCCGTAATAATGGCGCCGGTGGTGTTCATCATCAGATTTCAAGAGGGATTACATCTGTCATGAAACAACGATGA 873 49.6 MEIQVMTTSPAVSTNATPYTTAPSTPHRFPHLFYTAPTSPIHSLVSFPQHDDDNDFAFNFTGNPEPNSISAADDLFHAGKIKPLTSVSDEPPISPMCKKKNFDSFTETYNQTPGDHPETTQNPPKRGRKTTTKPLRIKHKVSRSSSPVRISDILSDEDPNRKNSLTWYSKWNLKNLILFRSASEGSARRIKDPVIKYSRITKSDEDVKISSFRSVDSCRSEVGTSRPAMRTVSAHEMHYTANRAVAEEMRRKTYLPYKAGLFGCLGFRNNGAGGVHHQISRGITSVMKQR 290
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi9g01597 290 PANTHER OS07G0619500 PROTEIN 20 269 - -
Mimi9g01597 290 MobiDBLite consensus disorder prediction 105 128 - -
Mimi9g01597 290 MobiDBLite consensus disorder prediction 105 142 - -
Mimi9g01597 290 Pfam Protein of unknown function (DUF1645) 72 256 IPR012442 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi9g01597 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
130259 Mimi3g00916 Mimi9g01597
421434 Mimi17g00123 Mimi9g01597
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr14:24861371 Mimi9g01597 Mimi-Chr9:60162232 dispersed
Mimi Mimi-Chr18:86869067 Mimi9g01597 Mimi-Chr9:60162232 dispersed
Mimi Mimi-Chr3:21949090 Mimi9g01597 Mimi-Chr9:60162232 transposed
Mimi Mimi-Chr17:3523655 Mimi9g01597 Mimi-Chr9:60162232 wgd
Mimi Mimi-Chr3:17260895 Mimi9g01597 Mimi-Chr9:60162232 wgd