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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi9g01615 ATGGAAAACCCTAAACACGTACTGTCCAAACAACGGTCATGGTCACCGGACATCCACCGTGACATTGAATGGCAGAAGCTTAAGAACAAGCAGCGACGTCGCCGGAGCAAAACAATCGACGACGTCACAGATGATGACGTCAAGGAGCTGAAAGCGTGCTTTGATTTAGGTTTCGGTTTCAGCGATTCAGATCCCAAACTTTCGCACGCTTTTCCCGCTCTTGGATTTTACGCCGCCGTTAACCGCCGGCAATACATGAACACCGGACTCCTGTCTAGGTCTTCGTCTCTAGCCTCGGATTCGTCATCAACTTCATCGACTCTAACCATCATCGATCCAGGTGATGATCCAGAAAAGGTGAAGATGAAATTGAAACAATGGGCTCAGCTGGTTTCATGTTCAGTTCTGGAATCTTCTTCGCAGCTAACAAATAGCAAAAGGGTTGCTGAATGA 453 47.68 MENPKHVLSKQRSWSPDIHRDIEWQKLKNKQRRRRSKTIDDVTDDDVKELKACFDLGFGFSDSDPKLSHAFPALGFYAAVNRRQYMNTGLLSRSSSLASDSSSTSSTLTIIDPGDDPEKVKMKLKQWAQLVSCSVLESSSQLTNSKRVAE 150
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi9g01615 150 Pfam Protein of unknown function (DUF1685) 42 99 IPR012881 -
Mimi9g01615 150 PANTHER OSJNBA0071G03.3 PROTEIN 8 136 - -
Mimi9g01615 150 MobiDBLite consensus disorder prediction 94 111 - -
Mimi9g01615 150 MobiDBLite consensus disorder prediction 94 116 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi9g01615 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
421428 Mimi17g00105 Mimi9g01615
421430 Mimi17g00110 Mimi9g01615
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr15:68731991 Mimi9g01615 Mimi-Chr9:60903048 dispersed
Mimi Mimi-Chr17:3181571 Mimi9g01615 Mimi-Chr9:60903048 dispersed
Mimi Mimi-Chr1:102130988 Mimi9g01615 Mimi-Chr9:60903048 dispersed
Mimi Mimi-Chr8:57925991 Mimi9g01615 Mimi-Chr9:60903048 dispersed
Mimi Mimi-Chr17:3123599 Mimi9g01615 Mimi-Chr9:60903048 wgd