AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00471 ATGGATTTCTTCAAGAGCAACGCCGGAAATTTAGCTCTACTGTCTCTTCTCTTGGTTGGAGTTCTAGCTGCTTCAGTTCTGTTTCCCTCCATGCCTAATGTCTTCTCTTCAGTCAAGATGAACAACCCATGTTCTCCATCAGTCATGAACACCATTGCTGCTTCAAAGGATGATCTCGAGAAGGCTTTGAAGGAGGTTTCAATGGCAGACAAGACTGTAATAATCTCTATGGTAAACAAGGCTTACGTCGAGAGTGAGGAGAAGACGATGCTGGATCTCTTCATGGAGAGTTTCTGGTCGGGAGAAGGTACTCGGTCATTGGTGAATCACCTGCTGCTTGTGACAGTCGATCAAACGGCTTTCGATCGCTGCATGTTTTTAAGGCTGCGCTGCTACAGACTTTGGATCGACGACATGGATTCCGAAGGAGAGAAACTGTACATGTCTGATGAGTTTATCAAGATGATGTGGAGAAGAACCCTCTTCCTTGCCGATGTTCTGAGGCGAGGTTACAGTTTCATCTTCACGGACATGGACGTAATTTGGCTAAGAAACCCATTCACGAGGTTGTCTCAAGACCAGAGAGAGGATCTACAGATCAGTTGTGACAGGTTCTATGGTGATTCCTGGTCTGCTGCTAACCCCATCAACACCGGCTTCTACTACGTCAGATCCAACAGCAAGACAGTGGCATTGTTTGAAGCTTGGTACGCCATGAAAGCCAACTCCACGGGAAAGAAAGAGCAGGACGTACTACAGGAGATGCGAGACATGGGTGAGCTCTCCAGGTTAGGGATCAAAGTGAGGTACTTGGACACCCTCTATTTCAGTGGCTTCTGCCATGATAGCAGAGATTTTGGAGCAGTGATCACCGTTCACGCCAACTGTTGTCGTACTATAAATGCAAAGGTGGCCGATCTCTGGGCCGTGCTTCATGACTGGAACAGGTTCAAGGCTTTTACCAACCAAACATCGTCCTTCCAATGGTCGAACCGTACTGCTTGTATTCAGTCATGGTGA 1020 47.35 MDFFKSNAGNLALLSLLLVGVLAASVLFPSMPNVFSSVKMNNPCSPSVMNTIAASKDDLEKALKEVSMADKTVIISMVNKAYVESEEKTMLDLFMESFWSGEGTRSLVNHLLLVTVDQTAFDRCMFLRLRCYRLWIDDMDSEGEKLYMSDEFIKMMWRRTLFLADVLRRGYSFIFTDMDVIWLRNPFTRLSQDQREDLQISCDRFYGDSWSAANPINTGFYYVRSNSKTVALFEAWYAMKANSTGKKEQDVLQEMRDMGELSRLGIKVRYLDTLYFSGFCHDSRDFGAVITVHANCCRTINAKVADLWAVLHDWNRFKAFTNQTSSFQWSNRTACIQSW 339
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00471 339 PANTHER EXPRESSED PROTEIN-RELATED 26 335 IPR044821 -
Nenu1g00471 339 Pfam Nucleotide-diphospho-sugar transferase 107 307 IPR005069 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00471 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:13169958 Nenu6g00985 Nenu-Chr6:35213519 dispersed
Nenu Nenu-Chr1:13169958 Nenu3g00419 Nenu-Chr3:9206794 transposed