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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00488 ATGTCCATGGCATTGTTTTCTCCTTCTCCTCCTTCTCATCTCCCTGGAGTCTCTTATAAACTTTCTTCAAGAACAACCCATTTTTCTCAGAAGTCTTGTCTTTCTCTGATATCCAAGAGAAATCCGTGTTTGTTATCTGCAAGGGCATTGGATAATGGAGCTGGACTAGTGGGTTCTGCTGCTACTGTAGAGGAGGAGAAAGTAGAAAAGGAGGAAGTTTCTCCCGCCAAACCTGAGAAGAAGTTGCAGATAGAAGAGGTCTCTGTTGGGTCTAATGGGGCGGCCTCGTCGGTGGCGAAGGCTGTGCCCAGGTTCCAAGACCCTAGATGGCTCGGAGGGACTTGGGATTTGAAGCAGTTTCAGAAAGATGGAAAGACCAACTGGGACGCCGTTATTGATGCAGAGGTCAGGAGACGGAAATGGCTTGAAGAAAATCCAGAATCATCTAATAATGATGATCCTGTAGTCTTTGATACCTCCATTATTCCCTGGTGGGCATGGATGAAAAGATTCCATCTTCCTGAAGCTGAGCTACTCAATGGTCGTGCTGCGATGATAGGGTTCTTCATGGCTTATTTTGTGGATAGCTTGACTGGGGTAGGTCTTGTCGATCAGATGGGGAACTTTTTCTGCAAAACTCTCTTATTTGTAGCTGTAGCTGGAGTTCTTCTAATCAGGAAGAATGAGGATTTAGAAACTTTGAAAAAACTTATAGAAGAAACAACATTCTATGATAAGCAGTGGCAAGCAACATGGCAGGATGAGAATGCCAGTGATTCCAAGAAAGACTAA 792 44.44 MSMALFSPSPPSHLPGVSYKLSSRTTHFSQKSCLSLISKRNPCLLSARALDNGAGLVGSAATVEEEKVEKEEVSPAKPEKKLQIEEVSVGSNGAASSVAKAVPRFQDPRWLGGTWDLKQFQKDGKTNWDAVIDAEVRRRKWLEENPESSNNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLLIRKNEDLETLKKLIEETTFYDKQWQATWQDENASDSKKD 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00488 263 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 144 227 - -
Nenu1g00488 263 Gene3D Chlorophyll a-b binding protein domain 102 216 - -
Nenu1g00488 263 SUPERFAMILY Chlorophyll a-b binding protein 99 211 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00488 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:13645592 Nenu6g00993 Nenu-Chr6:35351277 dispersed
Nenu Nenu-Chr1:13645592 Nenu6g00992 Nenu-Chr6:35348032 wgd