Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu1g00535 | ATGGCAACTGCTAACCCTTTCGACCTGTTGGGTGACGATGATAACGACGATCCGTCGCAGTTGATCGCTGCTCAGCAGCAGAAGTTGTTACCGAAGAAAGCCCTATCTCCGACGCAAGCCACTGCTCCACAGCAGACCAAGCAGGCTAAGCTGCCCACCAAACCCCTTCCACCGGCCCAGGCTGTAAGAGAGGCAAAGAACGAACCTGCCCGTGGAGGCCGAGGTGGTGGACGTGGATTTGGCCGTGGTGGTGGGCGTGGATTCAATAGAGATTCAGTTAATAACGAAAATGCATTTAGCAGCAATGGATTCTCTGGAGGGTATGGTGCCCTGAAGAGGGAGATACTGGGAAACCCTCTGAAAGGCGTGGCTATGGTGGACCACGTGGTCCTTACCGTGGTGGTCGTCGGGGCGGATTCAATAATGACGAAGTGGCAGAAGGGGAGCGCCCTAAGAGGATATTTGAACGTCGGAGTGGGACTGGTCGAGGGTGAATATCCATTTTGCATAAATGAGATGAAACGTGAAGGATCTGGTCGTGGTAACTGGGGAACTCCCACTGATGAAATCGTACAGGAGACTGAGGAAGTTGAGAAGACTACAATTACTGAGAAGACAGGGGGAGAGGATGAAACTGGGGATACCAACAAGGAGAATCCTGTAAATGAGCCAGAAGAGAAGGAACCTGAAGATAAGGAAATGACACTTGATGAGTATGAGAAGGTACTGGAAGAGAAACGCAAGGCTCTGCAGGCACTGAAGACCGAGGAACGGAAGGTGAACTTGGACAAGGACTTTGAATCCATGCAGCAGCTTGCTAGCAAGAAGGGCAATGACGATGTCTTCATTAAATTGGGTTCGGAGAAGGACAAGCGCAAAGAGGCGATTGACAAGGAAGAGAGAACTAAAAAGTCTGTGAGCATTAATGAATTCCTAAAGCCTGCTGAAGGAGGGAGATATTATAGCCCTGGAGGGCGTGGTCGTGGACGCGGAGGCCGAGGTTCCAGAGGAGGATTTAGTGGTGTGAACCAGGCGAGCAATGTGGTGGCCCCGTCAATTGAAGATCCCGGGCAATTCCCAACCTTGGGTGGCAAGTGA | 1098 | 51.46 | MATANPFDLLGDDDNDDPSQLIAAQQQKLLPKKALSPTQATAPQQTKQAKLPTKPLPPAQAVREAKNEPARGGRGGGRGFGRGGGRGFNRDSVNNENAFSSNGFSGGYGALKREILGNPLKGVAMVDHVVLTVVVVGADSIMTKWQKGSALRGYLNVGVGLVEGEYPFCINEMKREGSGRGNWGTPTDEIVQETEEVEKTTITEKTGGEDETGDTNKENPVNEPEEKEPEDKEMTLDEYEKVLEEKRKALQALKTEERKVNLDKDFESMQQLASKKGNDDVFIKLGSEKDKRKEAIDKEERTKKSVSINEFLKPAEGGRYYSPGGRGRGRGGRGSRGGFSGVNQASNVVAPSIEDPGQFPTLGGK | 365 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu1g00535 | 365 | MobiDBLite | consensus disorder prediction | 195 | 234 | - | - | |
| Nenu1g00535 | 365 | MobiDBLite | consensus disorder prediction | 19 | 51 | - | - | |
| Nenu1g00535 | 365 | Pfam | Hyaluronan - mRNA binding family | 171 | 260 | IPR006861 | - | |
| Nenu1g00535 | 365 | SMART | HABP4-PAI-RBP1-2 | 164 | 261 | IPR006861 | - | |
| Nenu1g00535 | 365 | MobiDBLite | consensus disorder prediction | 291 | 365 | - | - | |
| Nenu1g00535 | 365 | Coils | Coil | 236 | 263 | - | - | |
| Nenu1g00535 | 365 | MobiDBLite | consensus disorder prediction | 291 | 307 | - | - | |
| Nenu1g00535 | 365 | Pfam | Stm1 | 1 | 76 | IPR019084 | - | |
| Nenu1g00535 | 365 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
| Nenu1g00535 | 365 | PANTHER | HYALURONIC ACID-BINDING PROTEIN 4 | 1 | 109 | IPR039764 | GO:0003723(PANTHER)|GO:0003723(InterPro)|GO:0005634(PANTHER)|GO:0005737(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu1g00535 | K13199 | plasminogen activator inhibitor 1 RNA-binding protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:164710878 | Nenu1g00535 | Nenu-Chr1:14867378 | transposed | |
| Nenu | Nenu-Chr1:14867378 | Nenu6g01029 | Nenu-Chr6:35910462 | wgd |