AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu1g00546 | ATGGAAAGGATTCCCGAGTCAAAGGCACTTCCTGGGCAACTGCCTGTAGCAAGTCAGGTGACAAATGTACGTGCAAATCTGGTACGAGAGGAAGAGGGTCCATCCAGCGCAAGAGGATCTCGCAGTTCAGACTCACCTGCTTTGGTAAAAGCATGGAAAGGAAAAAGCTCTTCCCAGGAAGCGGCGGACCTTATGCCCGACGTTGTATCACTTAAGGGAAGTGGAGATTCCTATGAAGAAGTTGGCTCTACTTCCTTCTCTGGGGCTAGTCATCCCCCCGAACCTGTTGATACAGATCTTATGAGAACGGTCTATGTGCCAATAGGGCAGAACAAATCTGAACCTGGGTGCTTGGTGAAAAGCTTGTCTATGAAGGGTCCTTTTATAGAGGATCTTTCAATCCGGGTTCCTATGAAGCCAACTACAACTGTTCTTTCAGCTGCAGAAAGCCTGGTTGAAGAACCAAATGACCTGGGTGCATCATCATCATCTCCATTTTCAGTTGCCCGTGCATCACAAACTACAGAAACCACACATCTACCACCTGAGTCTGATGAGAAGGAATGTGTTTGGGATGCATCTTTGCCTCCTAGTGGTAATGTAAGTCCACATAGTAGTATTGACAGTACAGGTGTTGTCACTGCTATGAGCATTGTCAATAGCTGCACCAGTACATACAGGAGTGATGGGATTACTAGTGATGGTATGCTTAGTGTAGAAAGAAACTGTGAAAGTGCAAAGGGGAGTGTTAGAGGAGACTCACTTGAGAGTGCAAAAACTAGTGTTAGCAGAGCAAGTGATAGCAGTGGTCTTAGTGATGACAGTAATTGGAGTAACATTACTGGGAGTGCTAATAAGCCTCACAAAGGAAATGATCCTAGATGGAAAGCTATTCTTGCTGTCCGGGCACGGGATGGGATTTTGGGTATGAGCCATTTTAGGTTGCTCAAAAGACTTGGTTGTGGAGATATTGGCATGGTTTATCTCTCAGAGTTGAGTGGGACAAGGTGTTACTTTGCAATGAAAGTAATGGACAAGGCATCTCTTGCAAGCAGGAAGAAGTTGACCAGGGCTCAGACAGAAAGAGAAATTCTTCAGCTCCTTGACCATCCATTTCTACCTACTTTGTACACACACTTTGAGACAGACAGGTTCTCATGTTTGGTCATGGAATACTGTCCTGGAGGTGATTTGCACACTCTAAGGCAGCGACAACCTGGGAAACACTTCTCCGAGTATGCTGCACGGTTTTATGCTGCAGAAGTGTTGTTGGCCCTTGAGTATCTCCACATGCTTGGAGTTGTCTACAGGGACTTGAAACCAGAAAATGTTCTTGTCCGTGATGATGGCCACATAATGCTCTCAGATTTTGACCTCTCTTTAAGGTGTGCAGTTTCACCTACCCTGATAAAGACATCCTCATTTGATTCTGATCCTTCCAAAAGGACAACTGGGAGTGCATTCTGTGTCCAGCCTGCCTGTATTGAACCAGCTTCTGTATGCATCCAGCCTGCATGCTTTATCCCGCGGATCTTTCCTCAGAAGAACAAGAAAAAAACCCGAAAACCTCGGGCAGAGCCTGGGCAGCCTGCGAGCACCCTTCCTGAGCTTGTAGCTGAACCAACAGCAGCACGGTCCATGTCCTTTGTTGGAACCCACGAATACCTGGCTCCAGAAATAATCAAGGGAGAAGGCCATGGCAGTGCAGTGGATTGGTGGACATTTGGTATCTTCTTGCATGAACTCCTATATGGAAAGACCCCATTCAAAGGATCAGGCAACCGCGCAACACTTTTCAATGTGGTTGGACAGCAGCTGAGATTCCCAGACTCACCGGCAACAAGTTACTCGAGTAGGGATCTTATCCGGGGCTTACTGGTGAAGGAACCCCAGCATCGACTTGGGGTGAAGAGGGGAGCAACTGAGATCAAGCAGCACCCCTTCTTTGAAGGTGTAAATTGGGCACTAATACGGTGTAGTACACCACCTGAGGTGCCAAGACCAGTGGAGACCGAGTTACCAGGGAAGTTTGGGGTAGTTGATACAGTTGGGGTGGGAAGCAACAGTAAGAGAATGGTAGGGGCAGACATGAAGTCCGGAGGCAAGTATTTGGACTTTGAGTTCTTCTAG | 2130 | 47.28 | MERIPESKALPGQLPVASQVTNVRANLVREEEGPSSARGSRSSDSPALVKAWKGKSSSQEAADLMPDVVSLKGSGDSYEEVGSTSFSGASHPPEPVDTDLMRTVYVPIGQNKSEPGCLVKSLSMKGPFIEDLSIRVPMKPTTTVLSAAESLVEEPNDLGASSSSPFSVARASQTTETTHLPPESDEKECVWDASLPPSGNVSPHSSIDSTGVVTAMSIVNSCTSTYRSDGITSDGMLSVERNCESAKGSVRGDSLESAKTSVSRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAVRARDGILGMSHFRLLKRLGCGDIGMVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSFDSDPSKRTTGSAFCVQPACIEPASVCIQPACFIPRIFPQKNKKKTRKPRAEPGQPASTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDSPATSYSSRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETELPGKFGVVDTVGVGSNSKRMVGADMKSGGKYLDFEFF | 709 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu1g00546 | 709 | Gene3D | Transferase(Phosphotransferase) domain 1 | 397 | 472 | - | - | |
| Nenu1g00546 | 709 | FunFam | serine-threonine-protein kinase D6PK-like | 397 | 464 | - | - | |
| Nenu1g00546 | 709 | FunFam | Serine-threonine-protein kinase D6PK-like | 311 | 396 | - | - | |
| Nenu1g00546 | 709 | MobiDBLite | consensus disorder prediction | 28 | 95 | - | - | |
| Nenu1g00546 | 709 | CDD | STKc-phototropin-like | 311 | 668 | - | - | |
| Nenu1g00546 | 709 | ProSitePatterns | Serine-Threonine protein kinases active-site signature. | 434 | 446 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Nenu1g00546 | 709 | Gene3D | Phosphorylase Kinase; domain 1 | 311 | 396 | - | - | |
| Nenu1g00546 | 709 | PANTHER | FLIPPASE KINASE 1-RELATED | 177 | 671 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
| Nenu1g00546 | 709 | MobiDBLite | consensus disorder prediction | 156 | 179 | - | - | |
| Nenu1g00546 | 709 | MobiDBLite | consensus disorder prediction | 155 | 189 | - | - | |
| Nenu1g00546 | 709 | FunFam | serine-threonine-protein kinase D6PK-like | 544 | 667 | - | - | |
| Nenu1g00546 | 709 | MobiDBLite | consensus disorder prediction | 254 | 286 | - | - | |
| Nenu1g00546 | 709 | SUPERFAMILY | Protein kinase-like (PK-like) | 295 | 670 | IPR011009 | - | |
| Nenu1g00546 | 709 | SMART | serkin-6 | 313 | 649 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Nenu1g00546 | 709 | MobiDBLite | consensus disorder prediction | 248 | 290 | - | - | |
| Nenu1g00546 | 709 | ProSiteProfiles | Protein kinase domain profile. | 313 | 649 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Nenu1g00546 | 709 | Gene3D | Transferase(Phosphotransferase) domain 1 | 545 | 666 | - | - | |
| Nenu1g00546 | 709 | MobiDBLite | consensus disorder prediction | 517 | 536 | - | - | |
| Nenu1g00546 | 709 | Pfam | Protein kinase domain | 314 | 464 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Nenu1g00546 | 709 | Pfam | Protein kinase domain | 546 | 649 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Nenu1g00546 | 709 | MobiDBLite | consensus disorder prediction | 77 | 91 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu1g00546 | K08286 | protein-serine/threonine kinase [EC:2.7.11.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:15443504 | Nenu1g05296 | Nenu-Chr1:147970625 | dispersed | |
| Nenu | Nenu-Chr3:72624656 | Nenu1g00546 | Nenu-Chr1:15443504 | transposed | |
| Nenu | Nenu-Chr1:15443504 | Nenu6g01040 | Nenu-Chr6:36330889 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Nenu1g00546 | . | 117 | 765 | AGC Kinase gene family | AT2G44830 | 74.586 | 0.0 | 952.0 | |
| Nenu1g00765 | . | 31 | 1160 | AGC Kinase gene family | AT5G62310 | 60.796 | 0.0 | 1345.0 | |
| Nenu1g01591 | . | 843 | 926 | AGC Kinase gene family | AT5G03640 | 70.115 | 2.19e-33 | 119.0 | |
| Nenu1g02023 | . | 1 | 542 | AGC Kinase gene family | AT3G23310 | 78.165 | 0.0 | 882.0 | |
| Nenu1g03488 | . | 6 | 505 | AGC Kinase gene family | AT5G09890 | 75.977 | 0.0 | 816.0 | |
| Nenu1g03975 | . | 1 | 443 | AGC Kinase gene family | AT3G14370 | 60.526 | 0.0 | 534.0 | |
| Nenu1g05296 | . | 2 | 586 | AGC Kinase gene family | AT5G47750 | 73.432 | 0.0 | 870.0 | |
| Nenu1g05436 | . | 91 | 586 | AGC Kinase gene family | AT5G47750 | 84.507 | 0.0 | 857.0 | |
| Nenu1g05498 | . | 135 | 429 | AGC Kinase gene family | AT3G08720 | 35.69 | 1.36e-46 | 173.0 | |
| Nenu1g06836 | . | 12 | 366 | AGC Kinase gene family | AT4G13000 | 56.8 | 1.11e-139 | 401.0 | |
| Nenu2g01192 | . | 11 | 525 | AGC Kinase gene family | AT2G26700 | 57.252 | 0.0 | 557.0 | |
| Nenu2g01907 | . | 1 | 996 | AGC Kinase gene family | AT3G45780 | 68.865 | 0.0 | 1375.0 | |
| Nenu2g02243 | . | 146 | 293 | AGC Kinase gene family | AT3G20830 | 50.0 | 1.15e-37 | 130.0 | |
| Nenu2g02669 | . | 4 | 491 | AGC Kinase gene family | AT5G04510 | 76.844 | 0.0 | 782.0 | |
| Nenu2g03652 | . | 16 | 408 | AGC Kinase gene family | AT3G20830 | 58.293 | 4.27e-156 | 444.0 | |
| Nenu3g00100 | . | 2 | 161 | AGC Kinase gene family | AT2G34650 | 59.77 | 5.14e-52 | 169.0 | |
| Nenu3g00119 | . | 2 | 96 | AGC Kinase gene family | AT2G34650 | 40.385 | 1.43e-10 | 55.1 | |
| Nenu3g00532 | . | 667 | 941 | AGC Kinase gene family | AT1G45160 | 32.414 | 4.58e-35 | 144.0 | |
| Nenu3g01102 | . | 1 | 412 | AGC Kinase gene family | AT2G34650 | 65.566 | 0.0 | 546.0 | |
| Nenu3g01513 | . | 1 | 546 | AGC Kinase gene family | AT3G23310 | 80.037 | 0.0 | 889.0 | |
| Nenu3g02221 | . | 659 | 851 | AGC Kinase gene family | AT2G36350 | 52.475 | 2.73e-55 | 186.0 | |
| Nenu3g02483 | . | 134 | 234 | AGC Kinase gene family | AT5G58140 | 41.818 | 2.80e-20 | 93.6 | |
| Nenu3g02534 | . | 1 | 1289 | AGC Kinase gene family | AT3G17850 | 63.479 | 0.0 | 1575.0 | |
| Nenu3g02688 | . | 104 | 285 | AGC Kinase gene family | AT3G45780 | 54.098 | 3.75e-50 | 174.0 | |
| Nenu3g03098 | . | 2 | 163 | AGC Kinase gene family | AT2G34650 | 58.721 | 8.32e-57 | 182.0 | |
| Nenu3g03358 | . | 119 | 491 | AGC Kinase gene family | AT5G58140 | 32.181 | 1.37e-60 | 209.0 | |
| Nenu3g03401 | . | 70 | 499 | AGC Kinase gene family | AT5G40030 | 76.749 | 0.0 | 696.0 | |
| Nenu3g03658 | . | 101 | 586 | AGC Kinase gene family | AT5G47750 | 75.102 | 0.0 | 745.0 | |
| Nenu4g00033 | . | 114 | 555 | AGC Kinase gene family | AT1G79250 | 72.383 | 0.0 | 652.0 | |
| Nenu4g00034 | . | 1 | 438 | AGC Kinase gene family | AT2G34650 | 64.043 | 0.0 | 572.0 | |
| Nenu4g00249 | . | 30 | 1159 | AGC Kinase gene family | AT5G62310 | 61.441 | 0.0 | 1348.0 | |
| Nenu4g00335 | . | 73 | 297 | AGC Kinase gene family | AT1G53700 | 48.899 | 4.16e-62 | 201.0 | |
| Nenu4g01512 | . | 134 | 233 | AGC Kinase gene family | AT5G58140 | 37.615 | 1.38e-15 | 78.6 | |
| Nenu4g01551 | . | 783 | 821 | AGC Kinase gene family | AT3G45780 | 64.103 | 4.24e-12 | 59.7 | |
| Nenu4g01572 | . | 1 | 1289 | AGC Kinase gene family | AT3G17850 | 65.859 | 0.0 | 1629.0 | |
| Nenu4g01703 | . | 453 | 503 | AGC Kinase gene family | AT3G45780 | 66.667 | 7.35e-14 | 68.9 | |
| Nenu4g02305 | . | 119 | 504 | AGC Kinase gene family | AT5G58140 | 32.997 | 1.29e-64 | 220.0 | |
| Nenu4g02370 | . | 24 | 459 | AGC Kinase gene family | AT3G08720 | 61.261 | 0.0 | 545.0 | |
| Nenu4g02647 | . | 98 | 586 | AGC Kinase gene family | AT5G47750 | 75.0 | 0.0 | 751.0 | |
| Nenu5g00066 | . | 1 | 465 | AGC Kinase gene family | AT3G08720 | 68.595 | 0.0 | 656.0 | |
| Nenu5g01942 | . | 1 | 1013 | AGC Kinase gene family | AT1G45160 | 53.811 | 0.0 | 1066.0 | |
| Nenu5g02192 | . | 1 | 461 | AGC Kinase gene family | AT3G14370 | 61.229 | 0.0 | 559.0 | |
| Nenu5g02519 | . | 20 | 505 | AGC Kinase gene family | AT5G09890 | 76.591 | 0.0 | 795.0 | |
| Nenu5g02987 | . | 248 | 287 | AGC Kinase gene family | AT5G04510 | 75.0 | 7.11e-14 | 66.2 | |
| Nenu5g03061 | . | 67 | 311 | AGC Kinase gene family | AT5G04510 | 25.0 | 2.84e-17 | 84.0 | |
| Nenu6g00031 | . | 64 | 910 | AGC Kinase gene family | AT5G58140 | 73.059 | 0.0 | 1296.0 | |
| Nenu6g01040 | . | 100 | 765 | AGC Kinase gene family | AT2G44830 | 73.56 | 0.0 | 954.0 | |
| Nenu6g01925 | . | 1 | 451 | AGC Kinase gene family | AT3G44610 | 64.53 | 0.0 | 549.0 | |
| Nenu6g01926 | . | 6 | 949 | AGC Kinase gene family | AT2G36350 | 48.755 | 0.0 | 772.0 | |
| Nenu6g02003 | . | 4 | 486 | AGC Kinase gene family | AT3G10540 | 80.041 | 0.0 | 805.0 | |
| Nenu6g02354 | . | 1 | 483 | AGC Kinase gene family | AT4G33080 | 83.471 | 0.0 | 844.0 | |
| Nenu7g00310 | . | 16 | 408 | AGC Kinase gene family | AT3G20830 | 56.901 | 5.87e-148 | 423.0 | |
| Nenu7g01333 | . | 2 | 149 | AGC Kinase gene family | AT2G34650 | 60.494 | 7.61e-50 | 165.0 | |
| Nenu7g01530 | . | 177 | 285 | AGC Kinase gene family | AT3G45780 | 59.633 | 8.13e-35 | 129.0 | |
| Nenu7g01859 | . | 113 | 555 | AGC Kinase gene family | AT1G79250 | 73.23 | 0.0 | 669.0 | |
| Nenu8g00586 | . | 819 | 1027 | AGC Kinase gene family | AT3G17850 | 24.664 | 1.00e-09 | 60.1 | |
| Nenu8g00749 | . | 1 | 525 | AGC Kinase gene family | AT2G26700 | 57.895 | 0.0 | 575.0 | |
| Nenu8g01475 | . | 120 | 233 | AGC Kinase gene family | AT5G58140 | 40.65 | 7.59e-22 | 98.6 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Nenu | Pkinase | 2.3e-36 | CL0016 | PK | AGC_RSK-2 |