AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu1g00609 | ATGGACACAAATCCGAAGATTTCAACTGAGATCAACAGTCGACAGGGCTTAAAAGAAGTGAAAAATGCGAATGAAACTAGGAGGCAGCAGAAGACCAGCAGTAACGACGGGAAGCACCCTAGTTATCGTGGAGTGAGGATACGTAATTGGGGCAAATGGGTGTCGGAAATTCGTGAGCCAAGAAAGAAATCAAGAATCTGGCTTGGGACATTCCCCACTCCAGAGATGGCCGCCCGAGCCCATGATGTTGCTGCACTCGCTATCAAAGGCAATGCAGCTTTCCTCAATTTCCCTGAGCTGGCTCATGAGCTTCCCCGTCCGGCCAGCTTATCACACAAAGACATCCAGGCCGCTGCTGCCAAAGCAGCCGCGGCCACATTCGACAAGCAACCAGCAAGTTGCGAAGTTGAAACCGAAGACCAAGGCGAGCGGAGCGGATCAAAATTTCCAATTTCTGACTCCCCAAGTCTCAACTTCACGTCGGACGATGACGCTGGTGTTCGATCCACAGACGAAGACGCACTGTTCGATCTGCCTGATCTAGTAATCGACCAGACCACTACTCCAAACATGTTTGATTTCTCTTCGTCTTTGATGTCGCCTGCAGCCAATAACTTCGGATTACAAATGGATGAGCCATTCTTATTATGGGAGTACGACCACACAGAGTTCCTCTAG | 678 | 49.85 | MDTNPKISTEINSRQGLKEVKNANETRRQQKTSSNDGKHPSYRGVRIRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALAIKGNAAFLNFPELAHELPRPASLSHKDIQAAAAKAAAATFDKQPASCEVETEDQGERSGSKFPISDSPSLNFTSDDDAGVRSTDEDALFDLPDLVIDQTTTPNMFDFSSSLMSPAANNFGLQMDEPFLLWEYDHTEFL | 225 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu1g00609 | 225 | MobiDBLite | consensus disorder prediction | 128 | 164 | - | - | |
| Nenu1g00609 | 225 | SMART | rav1-2 | 41 | 104 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Nenu1g00609 | 225 | Gene3D | AP2-ERF domain | 41 | 99 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Nenu1g00609 | 225 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
| Nenu1g00609 | 225 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
| Nenu1g00609 | 225 | MobiDBLite | consensus disorder prediction | 147 | 164 | - | - | |
| Nenu1g00609 | 225 | Pfam | AP2 domain | 40 | 90 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Nenu1g00609 | 225 | ProSiteProfiles | AP2-ERF domain profile. | 41 | 98 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Nenu1g00609 | 225 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 28 | 191 | IPR051032 | - | |
| Nenu1g00609 | 225 | PRINTS | Ethylene responsive element binding protein signature | 64 | 80 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Nenu1g00609 | 225 | PRINTS | Ethylene responsive element binding protein signature | 42 | 53 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Nenu1g00609 | 225 | MobiDBLite | consensus disorder prediction | 20 | 34 | - | - | |
| Nenu1g00609 | 225 | FunFam | Ethylene-responsive transcription factor 2 | 40 | 99 | - | - | |
| Nenu1g00609 | 225 | SUPERFAMILY | DNA-binding domain | 41 | 99 | IPR016177 | GO:0003677(InterPro) | |
| Nenu1g00609 | 225 | CDD | AP2 | 40 | 100 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu1g00609 | K09286 | EREBP-like factor |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:17046454 | Nenu6g01079 | Nenu-Chr6:37214570 | dispersed | |
| Nenu | Nenu-Chr1:16913264 | Nenu1g00609 | Nenu-Chr1:17046454 | tandem | |
| Nenu | Nenu-Chr1:17046454 | Nenu1g00610 | Nenu-Chr1:17134278 | tandem |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Nenu1g00167 | . | 13 | 158 | CBF gene family | AT1G01250 | 64.865 | 2.37e-55 | 172.0 | |
| Nenu1g00554 | . | 9 | 267 | CBF gene family | AT4G17500 | 51.678 | 4.01e-84 | 252.0 | |
| Nenu1g00556 | . | 66 | 300 | CBF gene family | AT5G47230 | 48.617 | 2.11e-60 | 194.0 | |
| Nenu1g00608 | . | 105 | 199 | CBF gene family | AT2G44940 | 57.895 | 1.35e-30 | 108.0 | |
| Nenu1g00609 | . | 87 | 295 | CBF gene family | AT2G44940 | 45.581 | 7.66e-52 | 167.0 | |
| Nenu1g00610 | . | 87 | 299 | CBF gene family | AT2G44940 | 53.241 | 2.02e-57 | 185.0 | |
| Nenu1g00929 | . | 3 | 222 | CBF gene family | AT5G51990 | 57.466 | 5.85e-81 | 239.0 | |
| Nenu1g00930 | . | 58 | 231 | CBF gene family | AT5G52020 | 58.523 | 4.14e-54 | 172.0 | |
| Nenu1g01048 | . | 156 | 254 | CBF gene family | AT1G50680 | 28.431 | 7.82e-06 | 44.3 | |
| Nenu1g01250 | . | 11 | 335 | CBF gene family | AT4G27950 | 40.115 | 1.51e-64 | 206.0 | |
| Nenu1g01296 | . | 11 | 335 | CBF gene family | AT1G64380 | 45.562 | 2.25e-61 | 197.0 | |
| Nenu1g01865 | . | 29 | 197 | CBF gene family | AT5G44210 | 43.787 | 3.46e-35 | 120.0 | |
| Nenu1g01971 | . | 16 | 135 | CBF gene family | AT3G23230 | 55.147 | 1.15e-38 | 126.0 | |
| Nenu1g01972 | . | 16 | 135 | CBF gene family | AT3G23230 | 60.833 | 2.08e-43 | 137.0 | |
| Nenu1g01973 | . | 16 | 91 | CBF gene family | AT3G23230 | 68.831 | 6.68e-34 | 113.0 | |
| Nenu1g01974 | . | 16 | 139 | CBF gene family | AT3G23230 | 61.24 | 2.58e-46 | 145.0 | |
| Nenu1g01975 | . | 36 | 215 | CBF gene family | AT3G23240 | 59.14 | 2.44e-72 | 218.0 | |
| Nenu1g02193 | . | 16 | 121 | CBF gene family | AT1G75490 | 66.981 | 1.62e-44 | 145.0 | |
| Nenu1g02408 | . | 1 | 225 | CBF gene family | AT1G50640 | 55.144 | 1.62e-51 | 165.0 | |
| Nenu1g02886 | . | 147 | 313 | CBF gene family | AT2G20880 | 47.368 | 9.39e-54 | 180.0 | |
| Nenu1g03014 | . | 1 | 198 | CBF gene family | AT5G44210 | 43.243 | 7.29e-46 | 150.0 | |
| Nenu1g03077 | . | 48 | 177 | CBF gene family | AT5G47220 | 51.145 | 6.06e-39 | 130.0 | |
| Nenu1g03123 | . | 2 | 192 | CBF gene family | AT4G27950 | 43.979 | 1.76e-41 | 141.0 | |
| Nenu1g03477 | . | 23 | 202 | CBF gene family | AT4G34410 | 48.404 | 1.56e-39 | 137.0 | |
| Nenu1g03539 | . | 76 | 424 | CBF gene family | AT4G36920 | 55.607 | 3.53e-118 | 349.0 | |
| Nenu1g03544 | . | 29 | 148 | CBF gene family | AT1G46768 | 65.041 | 3.04e-50 | 156.0 | |
| Nenu1g03717 | . | 1 | 94 | CBF gene family | AT1G12890 | 56.842 | 3.81e-30 | 107.0 | |
| Nenu1g03802 | . | 1 | 334 | CBF gene family | AT1G78080 | 45.455 | 1.83e-82 | 253.0 | |
| Nenu1g03977 | . | 1 | 444 | CBF gene family | AT5G10510 | 58.462 | 8.85e-154 | 450.0 | |
| Nenu1g04242 | . | 41 | 139 | CBF gene family | AT2G33710 | 59.596 | 2.42e-37 | 133.0 | |
| Nenu1g04478 | . | 13 | 303 | CBF gene family | AT4G18450 | 36.066 | 6.74e-44 | 149.0 | |
| Nenu1g04482 | . | 36 | 213 | CBF gene family | AT3G23240 | 44.624 | 8.80e-42 | 139.0 | |
| Nenu1g04554 | . | 1 | 198 | CBF gene family | AT5G44210 | 44.13 | 1.62e-47 | 154.0 | |
| Nenu1g04555 | . | 7 | 186 | CBF gene family | AT1G28360 | 45.989 | 5.00e-41 | 134.0 | |
| Nenu1g04693 | . | 47 | 250 | CBF gene family | AT2G20880 | 49.791 | 3.43e-53 | 180.0 | |
| Nenu1g04921 | . | 28 | 82 | CBF gene family | AT5G18450 | 65.455 | 3.88e-20 | 82.8 | |
| Nenu1g05153 | . | 1 | 244 | CBF gene family | AT3G20310 | 48.606 | 8.49e-48 | 156.0 | |
| Nenu1g05524 | . | 122 | 382 | CBF gene family | AT4G13620 | 45.902 | 3.72e-67 | 217.0 | |
| Nenu1g05553 | . | 161 | 275 | CBF gene family | AT1G68840 | 30.435 | 4.32e-17 | 73.6 | |
| Nenu1g05594 | . | 111 | 201 | CBF gene family | AT4G13040 | 76.923 | 1.76e-45 | 153.0 | |
| Nenu1g06035 | . | 1 | 229 | CBF gene family | AT1G21910 | 44.186 | 1.67e-47 | 154.0 | |
| Nenu1g06821 | . | 125 | 384 | CBF gene family | AT1G51190 | 74.725 | 1.10e-133 | 406.0 | |
| Nenu2g00147 | . | 72 | 160 | CBF gene family | AT2G40340 | 53.933 | 1.66e-28 | 103.0 | |
| Nenu2g00244 | . | 1 | 449 | CBF gene family | AT2G28550 | 49.421 | 1.77e-112 | 339.0 | |
| Nenu2g00507 | . | 1 | 306 | CBF gene family | AT2G40340 | 43.491 | 8.41e-74 | 231.0 | |
| Nenu2g00948 | . | 17 | 235 | CBF gene family | AT5G11590 | 58.974 | 2.55e-72 | 219.0 | |
| Nenu2g01041 | . | 1 | 182 | CBF gene family | AT2G40340 | 53.226 | 1.22e-54 | 179.0 | |
| Nenu2g01245 | . | 1 | 197 | CBF gene family | AT1G15360 | 64.5 | 5.12e-78 | 229.0 | |
| Nenu2g01389 | . | 10 | 91 | CBF gene family | AT5G44210 | 60.674 | 6.01e-27 | 101.0 | |
| Nenu2g01410 | . | 1 | 178 | CBF gene family | AT5G25190 | 63.978 | 2.48e-79 | 232.0 | |
| Nenu2g01551 | . | 11 | 343 | CBF gene family | AT1G16060 | 59.599 | 9.67e-121 | 350.0 | |
| Nenu2g01934 | . | 4 | 446 | CBF gene family | AT2G28550 | 49.312 | 5.56e-111 | 335.0 | |
| Nenu2g02129 | . | 61 | 123 | CBF gene family | AT2G40350 | 65.079 | 2.95e-23 | 88.2 | |
| Nenu2g02737 | . | 11 | 184 | CBF gene family | AT2G36450 | 56.906 | 1.20e-50 | 160.0 | |
| Nenu2g02739 | . | 25 | 221 | CBF gene family | AT5G51990 | 52.217 | 2.42e-59 | 184.0 | |
| Nenu2g02891 | . | 56 | 310 | CBF gene family | AT1G13260 | 49.027 | 1.40e-74 | 233.0 | |
| Nenu2g03654 | . | 1 | 568 | CBF gene family | AT1G51190 | 54.758 | 0.0 | 546.0 | |
| Nenu2g03696 | . | 7 | 272 | CBF gene family | AT3G57600 | 51.786 | 3.81e-85 | 254.0 | |
| Nenu3g00326 | . | 1 | 136 | CBF gene family | AT3G16770 | 52.941 | 1.78e-41 | 142.0 | |
| Nenu3g00327 | . | 1 | 246 | CBF gene family | AT3G16770 | 42.294 | 9.07e-57 | 180.0 | |
| Nenu3g00473 | . | 1 | 251 | CBF gene family | AT5G18560 | 49.035 | 1.27e-60 | 196.0 | |
| Nenu3g00542 | . | 88 | 173 | CBF gene family | AT5G05410 | 59.341 | 2.44e-26 | 99.0 | |
| Nenu3g01264 | . | 123 | 382 | CBF gene family | AT4G13620 | 42.903 | 1.06e-66 | 216.0 | |
| Nenu3g01560 | . | 13 | 218 | CBF gene family | AT3G23240 | 57.746 | 2.18e-75 | 225.0 | |
| Nenu3g01561 | . | 19 | 139 | CBF gene family | AT3G23230 | 67.769 | 2.53e-48 | 150.0 | |
| Nenu3g01562 | . | 14 | 139 | CBF gene family | AT3G23230 | 59.055 | 3.76e-43 | 137.0 | |
| Nenu3g01731 | . | 33 | 73 | CBF gene family | AT1G71450 | 63.415 | 4.07e-12 | 61.2 | |
| Nenu3g02046 | . | 37 | 161 | CBF gene family | AT1G01250 | 69.466 | 5.33e-56 | 173.0 | |
| Nenu3g02835 | . | 32 | 317 | CBF gene family | AT1G68550 | 31.193 | 2.25e-34 | 127.0 | |
| Nenu3g02881 | . | 1 | 343 | CBF gene family | AT1G13260 | 62.466 | 2.15e-150 | 426.0 | |
| Nenu3g02949 | . | 14 | 80 | CBF gene family | AT5G19790 | 68.657 | 2.98e-27 | 103.0 | |
| Nenu3g03671 | . | 1 | 221 | CBF gene family | AT1G24590 | 38.87 | 7.81e-42 | 147.0 | |
| Nenu3g04022 | . | 1 | 166 | CBF gene family | AT5G13330 | 55.056 | 8.43e-48 | 155.0 | |
| Nenu3g04051 | . | 7 | 203 | CBF gene family | AT5G13910 | 46.61 | 1.59e-53 | 171.0 | |
| Nenu4g00535 | . | 1 | 262 | CBF gene family | AT5G18560 | 47.925 | 5.64e-58 | 189.0 | |
| Nenu4g00681 | . | 1 | 243 | CBF gene family | AT3G16770 | 44.664 | 4.04e-58 | 184.0 | |
| Nenu4g00682 | . | 1 | 136 | CBF gene family | AT3G16770 | 55.072 | 9.25e-42 | 144.0 | |
| Nenu4g01940 | . | 17 | 317 | CBF gene family | AT1G68550 | 33.041 | 7.11e-37 | 133.0 | |
| Nenu4g02004 | . | 1 | 361 | CBF gene family | AT1G25560 | 61.34 | 9.65e-150 | 425.0 | |
| Nenu4g02667 | . | 55 | 227 | CBF gene family | AT1G24590 | 40.741 | 2.23e-39 | 140.0 | |
| Nenu4g02930 | . | 22 | 334 | CBF gene family | AT1G50680 | 51.32 | 2.10e-105 | 311.0 | |
| Nenu4g03040 | . | 2 | 150 | CBF gene family | AT5G61890 | 63.758 | 2.94e-51 | 168.0 | |
| Nenu4g03072 | . | 7 | 201 | CBF gene family | AT5G13910 | 47.131 | 5.22e-54 | 172.0 | |
| Nenu5g00062 | . | 12 | 216 | CBF gene family | AT4G27950 | 39.81 | 2.08e-38 | 135.0 | |
| Nenu5g00277 | . | 36 | 117 | CBF gene family | AT5G25810 | 69.512 | 9.63e-34 | 118.0 | |
| Nenu5g00323 | . | 24 | 183 | CBF gene family | AT1G71450 | 59.639 | 4.05e-57 | 178.0 | |
| Nenu5g00403 | . | 11 | 110 | CBF gene family | AT1G22810 | 64.0 | 2.14e-41 | 134.0 | |
| Nenu5g00936 | . | 50 | 229 | CBF gene family | AT1G21910 | 48.0 | 8.74e-46 | 150.0 | |
| Nenu5g01151 | . | 91 | 215 | CBF gene family | AT3G23240 | 57.6 | 8.88e-45 | 143.0 | |
| Nenu5g01401 | . | 78 | 151 | CBF gene family | AT5G61890 | 77.027 | 2.16e-34 | 126.0 | |
| Nenu5g01588 | . | 47 | 334 | CBF gene family | AT1G78080 | 47.262 | 1.25e-82 | 255.0 | |
| Nenu5g01653 | . | 15 | 99 | CBF gene family | AT1G75490 | 82.353 | 1.36e-46 | 150.0 | |
| Nenu5g01912 | . | 33 | 75 | CBF gene family | AT1G71450 | 65.116 | 2.70e-14 | 62.0 | |
| Nenu5g01990 | . | 113 | 173 | CBF gene family | AT5G05410 | 50.0 | 4.88e-09 | 52.4 | |
| Nenu5g02190 | . | 1 | 443 | CBF gene family | AT5G10510 | 56.739 | 1.83e-145 | 429.0 | |
| Nenu5g02536 | . | 27 | 202 | CBF gene family | AT4G34410 | 51.136 | 5.35e-42 | 144.0 | |
| Nenu5g02565 | . | 1 | 432 | CBF gene family | AT4G36920 | 50.916 | 1.43e-130 | 386.0 | |
| Nenu5g02570 | . | 13 | 179 | CBF gene family | AT5G67190 | 54.706 | 4.59e-54 | 167.0 | |
| Nenu5g02801 | . | 1 | 467 | CBF gene family | AT4G37750 | 53.565 | 5.03e-167 | 488.0 | |
| Nenu6g00784 | . | 45 | 191 | CBF gene family | AT4G27950 | 50.98 | 1.03e-38 | 132.0 | |
| Nenu6g01041 | . | 27 | 292 | CBF gene family | AT1G50680 | 53.333 | 1.57e-90 | 275.0 | |
| Nenu6g01044 | . | 8 | 267 | CBF gene family | AT4G17500 | 49.838 | 9.74e-81 | 244.0 | |
| Nenu6g01045 | . | 66 | 300 | CBF gene family | AT5G47230 | 48.81 | 5.21e-60 | 193.0 | |
| Nenu6g01079 | . | 90 | 292 | CBF gene family | AT2G44940 | 53.922 | 2.06e-57 | 184.0 | |
| Nenu6g01164 | . | 28 | 92 | CBF gene family | AT5G18450 | 48.485 | 2.82e-14 | 66.6 | |
| Nenu6g01358 | . | 58 | 231 | CBF gene family | AT5G52020 | 58.857 | 3.05e-55 | 174.0 | |
| Nenu6g01359 | . | 2 | 222 | CBF gene family | AT5G51990 | 58.371 | 2.92e-83 | 245.0 | |
| Nenu6g01567 | . | 182 | 467 | CBF gene family | AT4G37750 | 75.347 | 1.22e-144 | 431.0 | |
| Nenu6g01772 | . | 66 | 310 | CBF gene family | AT1G25560 | 53.878 | 1.53e-77 | 241.0 | |
| Nenu6g01944 | . | 38 | 221 | CBF gene family | AT5G51990 | 54.839 | 2.29e-64 | 197.0 | |
| Nenu6g01946 | . | 15 | 184 | CBF gene family | AT2G36450 | 49.708 | 5.90e-45 | 144.0 | |
| Nenu6g02409 | . | 1 | 408 | CBF gene family | AT1G72570 | 51.688 | 1.48e-139 | 410.0 | |
| Nenu6g02446 | . | 10 | 185 | CBF gene family | AT1G19210 | 53.535 | 9.64e-61 | 186.0 | |
| Nenu6g02447 | . | 7 | 116 | CBF gene family | AT5G21960 | 54.545 | 3.37e-38 | 129.0 | |
| Nenu6g02479 | . | 1 | 358 | CBF gene family | AT1G53910 | 45.202 | 1.41e-78 | 244.0 | |
| Nenu7g00084 | . | 10 | 251 | CBF gene family | AT5G19790 | 42.745 | 9.50e-48 | 157.0 | |
| Nenu7g00279 | . | 7 | 272 | CBF gene family | AT3G57600 | 50.357 | 1.46e-82 | 248.0 | |
| Nenu7g00308 | . | 21 | 568 | CBF gene family | AT1G51190 | 53.807 | 0.0 | 527.0 | |
| Nenu7g00405 | . | 29 | 422 | CBF gene family | AT2G41710 | 64.234 | 7.46e-164 | 466.0 | |
| Nenu7g01089 | . | 59 | 397 | CBF gene family | AT3G54320 | 54.572 | 1.53e-109 | 326.0 | |
| Nenu7g01185 | . | 9 | 335 | CBF gene family | AT4G27950 | 40.407 | 2.37e-63 | 202.0 | |
| Nenu7g01775 | . | 40 | 327 | CBF gene family | AT2G40220 | 43.0 | 2.27e-42 | 146.0 | |
| Nenu8g00024 | . | 1 | 358 | CBF gene family | AT1G53910 | 46.582 | 1.52e-80 | 249.0 | |
| Nenu8g00059 | . | 4 | 185 | CBF gene family | AT1G19210 | 52.239 | 2.98e-55 | 172.0 | |
| Nenu8g00137 | . | 1 | 411 | CBF gene family | AT1G72570 | 52.008 | 1.98e-141 | 415.0 | |
| Nenu8g00465 | . | 19 | 218 | CBF gene family | AT5G11590 | 62.745 | 5.60e-74 | 223.0 | |
| Nenu8g00817 | . | 1 | 199 | CBF gene family | AT1G15360 | 66.169 | 1.10e-81 | 239.0 | |
| Nenu8g01001 | . | 75 | 184 | CBF gene family | AT1G80580 | 55.469 | 2.01e-26 | 102.0 | |
| Nenu8g01034 | . | 1 | 174 | CBF gene family | AT5G25190 | 65.027 | 3.11e-78 | 229.0 | |
| Nenu8g01285 | . | 39 | 334 | CBF gene family | AT1G16060 | 64.263 | 1.83e-116 | 343.0 | |
| Nenu8g01479 | . | 68 | 558 | CBF gene family | AT5G57390 | 53.283 | 4.68e-163 | 472.0 | |
| Nenu8g01515 | . | 19 | 174 | CBF gene family | AT5G25190 | 39.752 | 1.43e-28 | 103.0 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Nenu | AP2 | 3.5e-14 | CL0081 | TF | AP2/ERF-ERF |