AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00615 ATGCAAGCAACATTTTGCCAAGCTATCCCTCCAAAACTACCCTATCCATCGAAGCTTTCCCCGGTGTACAGACTCCCAACACGAGCTAAAATGATCTCGATGCCTGAAAGGCAAGTGTCGGTCCCAGATGCAGACAACTCGGTTGCCGCGTTCTGGGACTATCAGTTCCTTTTCGTCTCCCAACGGTCAGAGTCGGTGGAGCCTGTCGTACTTCGTACAGTCGATGGCGCGATCCCTGCCGACTTCCCTTCCGGTACTTACTACCTAGTAGGACCCGGTATATTTTGTGACGACCACGGTTCAACGGTTCACCCTCTGGACGGCCATGGATACCTCCGCGCATTCGCTGTTGATGGGAATTCCGGTGAGGTCAGGTTCTCGGCGAGATACGTTAAGACAGAAGCGCAGAGGGAAGAGTGTGAAGGAAAGACCGGGAGCGGGAGGTGGCGGTTTACGCATCGAGGGCCGTTTTCGGTGTTGAGAGGAGGGAAGAAGATTTTGAATACAAAAGTGATGAAGAACGTAGCGAATACGAGCGTGTTGAGATGGGGAGGACGGTTGTTATGCATGTGGGAGGGTGGCAATCCATATGAGCTTGAAACTGAGACGTTGGATACGGTTGGAAGATTTGACTTTGATGTGACGGACGACAGCAATTTGTCGTCAAAAAGAGGGTTTAGCGGTGGTTTTTGGGATTTTGCGGCTTGCCTATTGAAGCCGATCCTTTACGGTGTGTTCAAGATGCCTCCAAAGAGATTGCTGGCCCACTACAAGATGGATTTTCAACGAAACAGACTGCTAATAATGTCCTGCAATGCGGAGGATATGCTGCTCCCTCTCAGCCATTTCACCTTCTACGAGTTCGATTTGGATTTCAAGTTACTGCAGAAGCAAGAGTTCAACATCCCCGACCACTTAATGATCCACGATTGGGCTTTCACAGATAACTATTATGTTGCAGTAGGCAATCGCATCAAACTCGATGTAATAGGATCATTGCAAGCACTATGTGGAATGTCTCCCATGATTTCTGCATTGTCAGTAAACCCTAACAAGCCCACATCACCCATCTACCTGCTTCCCCGGTTTCCTGAAAAGCTATTTGAGGATCGAGACTGGAGGGTGCCCATTGATGCTCCTTCACAGATGTGGCTATTACATGTTGGTAATGCATTCGAGCAAAGGGATAAGAAAGGGAATTTGGAGGTGCAAATACAGGCTAGTGCTTGTTCCTACCGGTGGTTCAATTTTCAGAAGTTGTTTGGATATAATTGGCAAAGCAATAGATTGGATCCTTCTTACATGAATGCAAGCGAAGAAGAAGAGTTATTGCCACACCTAGTTCAGGTGGCTATCAACTTCGATGCAGATGGAAAATGTCATGAATGCTCAGTGAAACCACTAAATAATTGGAGTAGACCATCAGACTTTCCTGCTATTAATCCAACTCGCTCTGGTAATAGAAATACTTACATCTATACAGCCGCTGCTTCTGGTTCTCGCCATCTATTACCACATTTTCCATTTGATATGTTGGCTAAGTTAAATTTGTCAAACAACTCTGTTTCCACTTGGTCTGTGGGAAGCCGTAGATTCATTGGTGAGCCCATCTTTGTTCCCAAAGGAAATGAAGAGGATGATGGATATGTCCTTGTGGTAGAGTATGCAGTTTCAATCCAGAGGTGTTACCTTGTGGTTTTAAATCCCAAGATAATAGGAGAAGCTGGTGCACTTGTAGCAAGACTGGAAGTTCCTAAACACCTGAATTTTCCCATTGGGTTTCATGGCTTTTGGTCTGCAGACTGTTAG 1809 46.38 MQATFCQAIPPKLPYPSKLSPVYRLPTRAKMISMPERQVSVPDADNSVAAFWDYQFLFVSQRSESVEPVVLRTVDGAIPADFPSGTYYLVGPGIFCDDHGSTVHPLDGHGYLRAFAVDGNSGEVRFSARYVKTEAQREECEGKTGSGRWRFTHRGPFSVLRGGKKILNTKVMKNVANTSVLRWGGRLLCMWEGGNPYELETETLDTVGRFDFDVTDDSNLSSKRGFSGGFWDFAACLLKPILYGVFKMPPKRLLAHYKMDFQRNRLLIMSCNAEDMLLPLSHFTFYEFDLDFKLLQKQEFNIPDHLMIHDWAFTDNYYVAVGNRIKLDVIGSLQALCGMSPMISALSVNPNKPTSPIYLLPRFPEKLFEDRDWRVPIDAPSQMWLLHVGNAFEQRDKKGNLEVQIQASACSYRWFNFQKLFGYNWQSNRLDPSYMNASEEEELLPHLVQVAINFDADGKCHECSVKPLNNWSRPSDFPAINPTRSGNRNTYIYTAAASGSRHLLPHFPFDMLAKLNLSNNSVSTWSVGSRRFIGEPIFVPKGNEEDDGYVLVVEYAVSIQRCYLVVLNPKIIGEAGALVARLEVPKHLNFPIGFHGFWSADC 602
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00615 602 PANTHER BETA-CAROTENE DIOXYGENASE 40 598 IPR004294 GO:0010436(PANTHER)|GO:0016121(PANTHER)|GO:0016702(InterPro)|GO:0045549(PANTHER)
Nenu1g00615 602 Pfam Retinal pigment epithelial membrane protein 59 599 IPR004294 GO:0016702(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00615 K17912 9-cis-beta-carotene 9',10'-cleaving dioxygenase [EC:1.13.11.68]