AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00627 ATGGCGGGAATAGTGAAGTACGGAATCGTAGGCGTGGGGATGATGGGGAGGGAACACCTGATCAATTTAGCCCATCTTCGGACGGAAGGCGTCGCCGTCGTTGGTATCGCCGACCCTCACGTCCCTTCTCAGAAACTCGCTCTGGATGTAGCCAAATCTTTTAACTGGGCACCGGAGGTTTTCTCAGGACACAAGGAATTATTGGAGAGTGGACTTTGTGATGTAGTGATTGTATCAACTCCAAACATGACTCACTATCAAATCCTTATGGATATCATCAACCACCCAAGGCCCCATCATGTACTTGTGGAGAAGCCATTGTGCACAACAGTTGCAGATTGCAAAAAGGTAATAGATGCTGCTGGTAGGAGGCCAGAGATATTGGTGCAAGTTGGCCTGGAGTATAGGTACATGCCACCTGTGGCTAAGCTGATAGAAATAGTTAATGGTGGAATACTTGGACAAGTCAAAATGGTGGCAATACGTGAACACCGGTTTCCTTTTCTGGTTAAGGTCAAAAATTGGAATCGTTTTAATTGTAATACAGGAGGAACTCTGGTAGAGAAGTGCTGTCACTTTTTTGATCTCATGAGACTGTTTGCAGCTGCAAATCCAGTTCGGGTGATGGCTTCTGGAGATATTGATGTTAACCACAAGGATGAAATCTATGAGGGAAAGGTACCTGATATCATTGATAATGCATTTGTTATCATTGAATTTGACAATGGTTCTCGTGGCATGCTTGACCTCTGCATGTTTGCTGAAGGGAGTAAAAATGAGCAAGAAATATCTGTTGTTGGTGACATTGGGAAGGGTGAGGCCTTTGTTCCTGAGAGTATCGTGCGGGTGGGCAGTCGAGCAACAGGGAGAGATGGAGTGCAAACTTTAAAAGCTGAGGACAAACGGATTAAATACGATGGGCTGCATCATGGATCGAGCTATTTGGAACACCTCAATTTCCTGTCTCTGCTGAGAGCTCAAGGTGTCCGAGCCCCTGCAGTAGATTTGCAGGATGGATTGCTTTCTGTCGCCATGGGTGTTGCAGCCCAGCTTTCAATAGAGAATGGCCGTTATGTTACCATTGAAGAAGTAATGAAGGAATAG 1104 45.56 MAGIVKYGIVGVGMMGREHLINLAHLRTEGVAVVGIADPHVPSQKLALDVAKSFNWAPEVFSGHKELLESGLCDVVIVSTPNMTHYQILMDIINHPRPHHVLVEKPLCTTVADCKKVIDAAGRRPEILVQVGLEYRYMPPVAKLIEIVNGGILGQVKMVAIREHRFPFLVKVKNWNRFNCNTGGTLVEKCCHFFDLMRLFAAANPVRVMASGDIDVNHKDEIYEGKVPDIIDNAFVIIEFDNGSRGMLDLCMFAEGSKNEQEISVVGDIGKGEAFVPESIVRVGSRATGRDGVQTLKAEDKRIKYDGLHHGSSYLEHLNFLSLLRAQGVRAPAVDLQDGLLSVAMGVAAQLSIENGRYVTIEEVMKE 367
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00627 367 Pfam Oxidoreductase family, C-terminal alpha-beta domain 146 361 IPR004104 -
Nenu1g00627 367 Gene3D - 4 134 - -
Nenu1g00627 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 191 IPR036291 -
Nenu1g00627 367 Pfam Oxidoreductase family, NAD-binding Rossmann fold 6 131 IPR000683 GO:0000166(InterPro)
Nenu1g00627 367 Gene3D Dihydrodipicolinate Reductase; domain 2 135 361 - -
Nenu1g00627 367 PANTHER - 3 366 IPR050424 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00627 - -