AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00639 ATGGATGGTTGCACTGTAGGTAAAGATGAAGAAACGGCTTGGAAGAGATATATGGAAGAACATTGTGCTTGTTCCAGTGGTGAAGCCCAACATAGGCGCACTAAGAGTGCTTCAGACACAAACTTGGATGCCACGACACATGCAGTTCCACATTCCACGGGAAAGAACTTGGATGTATCACATGATTTGCAGCCTACAACCAGGATTTACAGGGCACAAAGTCCAAGTTATACTAGGATCAGCTCTTCAGTCAGCCATCGAGCTTCCTTGGAGAAAGATATCGAACAGCTACAACTGCATTTGCAGCAGGAGAAGTCTATGAGAGTTGTGCTTGAGAAGGCAATGGGCCGAGCTTCTAGTACTTTATCACCTGGACACAGACACTTTGCTTCTCAGACAAAGGAGTTGATAGCAGAAATCGAGTTACTTGAAGAAGAAATTGCAAACCGTGAGAAGCATGTTCTATCTTTGTATAGAAGTATGTTTGATCAGTGCAGTAGTGCTACACCTTCTGGTCAAAGCTCAAACATTACATCTCCTGCCCATGCAAAGAATGAAGTAAGAAAGCACCCAAGTATAATTTCAAGTGCATTTTGCTCGTCATCAAAAAAGTTCCGATTGCAACCTTTCGAAGTTCTGGCTTCTGCAAAGGAATCCAGAAAGAAGAATGTGTTACTGCATTCAAAGACCAGGCATGTTTCACTATTGACTGGGAAAACTGATATTCATATGGAGAATAATTATTCAGATCCCATTAAGGTTTATGAAAAGAATCCAGGTGTGGAGAAAATTTCTTTAGCACATACTCTGAAAGATCATCTCTATCAGTGCCCAAGCAAATTATCTGAGGACTTGGTGAGGTGTATGGCTGCAATATACTGCTGGCTACATAGTGTGGCATCCACAAAGCCAGAAAAAAACCGTTCTCCTTTATTGTCAAGGTCATCAACCAGGGACTGGTCTTGCAAATCTGTGGTAGAAATACCTTGGATATCAACTGATAAGAATCAATGCTTTCATGCTTCTTATGCTATCAACAACTATAGGGTCTTAGTGGAACAATTGGAGAGAGTGAATGTGAGTCAAATTGGAGGCAATGCACAAATGGCATTTTGGATCAATGTGTACAATTCTCTTATTATGCATGCATACTTAGCATACGGAATTCCACATGGTTCAGTGAGAAGGATGGCCCTGTTTCACAAGGCTACTTACAACATTGGAGGGCATGCCATTAGTACAGATGTCATTGAGCAATCTATATTCAGATTCCGTACCCCCCGAATTGGCAGGTGGTTTGAGACCATCCTTTCAGCTGCCATGAGAAAGAAAGCAGGGGAAGAAAGACAACTTCTATATTCGAAGCTTGGCCTTCAAAGTTCTCAACCACTCATATGCTTTGCCCTTTGTACCGGAGCTTCTTCTGATCCTGTGCTAAAAGTCTACACTGCCGCAAATGTCATGGAGGAGCTAGAAATAGCCAAGAAGGAGTATCTGCAAGCTAATGTAGTTGTTAAGAAGTCAAGAAAAGTCTTTCTACCTAAACTACTAGAGAGGTATGCCAAAGAGGCCTCTATCACCTCAGATGATCTTTTGAAGTGGGTTTCCTTGAATGTAGATAAGAAGCTCCATGATTTAATTGGAAAATGCATTGATTGTAAACCTAAGAGGAAAACATCACAAATTGTGGAGTGGTTACCTTACAATACGAGGTTCCGGTACATCTTCGCAAAGGACTTAATGGAGAAGTCATTGTAG 1758 41.58 MDGCTVGKDEETAWKRYMEEHCACSSGEAQHRRTKSASDTNLDATTHAVPHSTGKNLDVSHDLQPTTRIYRAQSPSYTRISSSVSHRASLEKDIEQLQLHLQQEKSMRVVLEKAMGRASSTLSPGHRHFASQTKELIAEIELLEEEIANREKHVLSLYRSMFDQCSSATPSGQSSNITSPAHAKNEVRKHPSIISSAFCSSSKKFRLQPFEVLASAKESRKKNVLLHSKTRHVSLLTGKTDIHMENNYSDPIKVYEKNPGVEKISLAHTLKDHLYQCPSKLSEDLVRCMAAIYCWLHSVASTKPEKNRSPLLSRSSTRDWSCKSVVEIPWISTDKNQCFHASYAINNYRVLVEQLERVNVSQIGGNAQMAFWINVYNSLIMHAYLAYGIPHGSVRRMALFHKATYNIGGHAISTDVIEQSIFRFRTPRIGRWFETILSAAMRKKAGEERQLLYSKLGLQSSQPLICFALCTGASSDPVLKVYTAANVMEELEIAKKEYLQANVVVKKSRKVFLPKLLERYAKEASITSDDLLKWVSLNVDKKLHDLIGKCIDCKPKRKTSQIVEWLPYNTRFRYIFAKDLMEKSL 585
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00639 585 MobiDBLite consensus disorder prediction 26 60 - -
Nenu1g00639 585 MobiDBLite consensus disorder prediction 39 60 - -
Nenu1g00639 585 Coils Coil 133 153 - -
Nenu1g00639 585 Coils Coil 87 107 - -
Nenu1g00639 585 Pfam Protein of unknown function, DUF547 363 499 IPR006869 -
Nenu1g00639 585 MobiDBLite consensus disorder prediction 169 188 - -
Nenu1g00639 585 PANTHER UNCHARACTERIZED 61 580 - -
Nenu1g00639 585 Pfam Leucine-zipper of ternary complex factor MIP1 85 164 IPR025757 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00639 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:17914932 Nenu5g01883 Nenu-Chr5:58367563 dispersed
Nenu Nenu-Chr1:17914932 Nenu6g01113 Nenu-Chr6:37985807 wgd