AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00640 ATGCCTTTGATGGCTTCCCAAACCACCATTCCCACTTTTGTTTTGGCCTGTGGAAGGGATGCACCCATGGATTATGATGACAATGATTTCCAAAACCAGAATTTTCAGTTAGGTGCTGAAGAGAACACCAAATTTCCTCCAGGCTTACGCTCATATGCTCTTCCCAAATTTGATCTGGATGACAACCTCCAAGTCCACTTAAGGTTTGATAGTTTAGTTGAAACTGAGGTTTTACTTGGTATCCAAGGTCAAGAAGAAAACCAGTGGATTGAAGAGTTCTCCCGGGGAAATAGTGGGATAGAGTTTAGCTCCGGTGGGGCTGAATCTTGCTCCATTTCTAGGCGCGAAAATGTTTGGTCTGAGGCCGCTTCTTCAGAATCTGTTGAAATGCTATTGAAATCTGTTGGGCAGGATGAAATGATCACAGGACAGACTATTATTGAGGGGTCAGATGCTTGTGACGGACTTGATAACATAACAAATCAAATGGAACCCGCTTTAAATGAAGATGGTTCCATTCCATCTAATAGTGGGGATGCTGTAGATGTGGGCCCTACATTACCACCTAAGCAGTGTCCGGAGAGCTTTGCAGGGTTAAGTAAGGATGTTGTGGCAGTGCAGTCCCAGGTTGAAGCTACACCTCAATCTCACAAATGTGAAATGTCTGGTTATGGAAGTTTGAAAGACTTGGGTCCGATTATGTCTGGTGAAAAGTCCGACTCACCGTTGGCTGAGGGTAATCTGATGATTGATGAAAAGTGTACTGATAGAAATCAGAGGGAAGATGGTTCTTTAGTTGTTGGATCTGAGGAAAACAATCCACAGGATGATTCTGCTGTGTCAGAGACCATACAAATTGACAATCTTGTTCCAAGTATTGAGGAGTTGAATGCTACAGTGACCCAACAAAAGCCAGTGGAAGGTTCTGAGCAGCGTACCTCTTTTGACAATCCAGATGCTTTGCAAGAAGATGAGTCTGTAAAAGAGGGGGAAGGAGATGTTTCAAGCAAAGAGGATAAGTTAGATGATCAAAATTGTGATGGAAATACAGTTGAATCCACCATTAACAAGGTGGAGAACAATTCCAGTTCTGTGAAAAATATAGATTTTACAGTTCAGCTTCCAGTATGCAGTGAGCATCTGTGTTCTGAGCAGACTGAGCAGACTGAGCAGACTGTTCAGACCAGTAATTGGGAGGCTATGGTTTTGTCAAAAAGTAGTGAGGTAGGTGATAAAATTGTAGATGATACACATGACTCATCTTTAATATTGGAGAAAGAGATTGATAGTTTGGAAGGGGATGCTGCTAAGGTTAACAACAGCAATGTTGGAATTCCTTCTAAGCCAGTGTTGAATATGGGCCCTCTAGCACAGGCAATGGAGGGACAGACCCAGATTGCATCTTCTGAGAAACAAGACCATTTGTTGGAATCTGATGGTTACCAATTGGAATGTGGTATTTCAGGCTGTAATTCTGAGACATCTTTATTGAAGGTGGAGGACAAAAAACTCCTTGAGATTAACAGTAATAATCATGTGGAAAACCCTTCTTTTCTGATGGCAGAAGTCTGTTCCTCAACTAATATAATCCATGAAAAGCAAACAACTGAAGAAAGGGGTGATGATTATAATAGTTTGGGAGTTCAGGGGGATGATTGTAATTCAAAGGATCATGTATCAGTTTCCTTGCAGGCTGACTCATCGCAAATCTGCAATAGTAGTTTGGACATTGAGCCTTGTAAAATGGAGAATGCTAGTATGTCTACTGTTTCAGGTGGTACAGAAAGTGTTGATGATGGTTCTCTTGTTATGGAGAAGCATGTAGTATCTCTGTCTCATGGTCAAAGTACTGCTGAAGCAGAGGTGGGGGTGTGTGAACCAAAGTCTTCTTTGGTTGTTGGTGAAGAATCAGGAAATGGTATTGCCACAAATGAAGTTATTCAAGACAAAGAAGATATAATGCCATCTGTATGTGTTGGGGATGTTGCTCAGTTGGAAGGAAAGGAAGAATCTGTAACTGAAACGTTTACAGAATCAAATTTGGTTATGAAGGAGTGCTCCCTTGTGCCAAGTGAGCCGGCTTCTATTTCTGAAGTTGAAAATCTTGCAGTTTGTGATGGCACTGGGGAGCAGTTACCTGGGTCATCTGGTCAGTCTTCATCATCCGCTGGGACTGTTAGTACAACATTCCAGAATGAACCTGAGGCTGTGTTACCTGACAAAATTACTCAAGCCTACTCTTGTGAATTGGAAACACAACTTGTTGTTGATGATCCAGTTCCAAAAGAAGATGATAGTACTGGTGTAATAGGAGTTTCTAATGAGAAGTGCAAAGAGTCATCCCTAAATAGCACAGATGTTGGCTGTGGGTGCTCCGTAAGCTCTGCTACCGATTCTCTTTACCATGGTCCAGATGCTGGAAGCACTATTCCAGATTCAGAGGAACGTAACTGTGGTTCACCCACTGTCATTAGTTCTACTGAGGTTCCTCAAAATGAGAAGGAAAAAGGGAAAGGAGGCAATGGGTCCTTAGACCAGAATTCCCCTGTTTCTGATCATATGGATGGGCAGGGGAACAAAGTTGAACCTTGTACTGATGATATTAAGGGAAACAGTGCCACTGAAGACGATAGGAGCTTCACTTTTGAAGTGAGTGCACAGGAGGTTGATTTGTCTGACAGGGAGACTGATCGTGGATGGAGACCATTTCCCAGTGTTCAGCACTATGAATTTCATCAGACTGTAGAGGGTTCTCCTTCAACGTCTAGGTTAGGCCCAATTGATCCCAAGTTGCAAGGCACTAATCGTGGAAGTCATCGAGCATCTGATGGGGAGACTCCACGTGCCAGTTCTAAGGGTACATCTGACCATAAAAGGAGGAGAGCGTCTGGTAAGGGAACCGACAAAGAAGCTTCCAAGGAAGGGAAATCTCTAAAAGATCCTTTGAGGCAGGCAAAAGACAGAGGGGGCAGTTCATGTAGTGTATCTCCTACCTCATGTGGGACAGTAGGCCAAGTTGTGCAAGGTGAAGAAATGAGGTCCAGTGGATATATTGAAGGAAGTGTTACAAAACCTTGTGGTGTTCTAACTGCTCAGCCATCTACTCTGCCAGATTTGAATACTTCAGCTTCCTCATCCTCATTTCAACAACCTTTTACGGATTTACAACAAGTGCAATTGCGGGCTCAGATATTTGTTTATGGATCTTTGATACAAGGAACGGCTCCTGATGAGGCATGTATGGTCGCAGCCTTTGGAGAATCTGACGGTGGAAGAAGCTTGTGGGATAATGTGTGGCGTGCCTCTCTTCAAAGGCTTCACAACCAGAAACACATGCATGGTAACTCTGAGACCCCTCTGCAATCACATCCAGGTTCTAGGTTTCCAGAAGAAACAAGTAGGCAAAGTTCTATTCAGAATAAGGTTATTCGCACTCCTACTAGTCGAGCTGGGGGCAAAGGTGCCCCTTCAGCCACTATAAATCCTGTGATTCCCCCATCTCCCCTATGGAGTATTTCAACCCCTTCCCGTGATGGAATGCAGCCCGGCAGCATGCCAGGGAGCTCACTTTTAGATGCTAATCAGGCGCTTTCTCCATTGCATCATTATCAGTCACCTTATGTAAGGCATTATGTGGGAAACAGCAGCCCTTGGCTATCTCAGGCTCCTGCTGCTACGCCCTGGGTTGTTTCACCTGCAGCTTCCGTGCTTGATGCCAATGCTCTTTACTCTGCCTTTCCCATTACAGAAACAGGACATGTAACTACTGTTCGAGAAATTTCCGTAACACATCCCTCCACTATGCAGCATACTCCTCCCAGTTCTTTGGTTCATTCTGGGGGTTCCACAAGTGTTCCTGCAGGGCCTCCACCTTTGCCAGAGGTGAAAAGAGCAATAGTATCACCTAGCAAGACTGCTTCTGCTGATCCAAAGCCTAGGAAGAGAAAAAGGAGTATGGCTTCTGAGGAGTCTGGCCACATGTCTTTGGTTGCTCAACCTCAAACAGAATCTGTTTCTGCTGTTGTTGTTACTAATCATCTCCCTACTTCTGTTGCTATCACACCATCTGCAGCTAAAACTTCTACCAATTCTATGTTAACTAATTCACCCATATCTGCAACACATTTCCAGATAATAGGGGGTCAGGACATGGAGCAGAGGGTAATCTTTTCAGAAGAGACATGCAGTAAAGTTGAACAAGCTAAGCAACATGCAGAAGATGCTGCTGCTCTTGCTGCCACTGCAGTTGGTCACAGCCAAAGTATATGGAGCCAGTTAGCTGTCCAGAAAATTTCTGGTTTGGTTTCAGATGTTGAAGCTAAACTGGCTTCTGCAGCTGTTGCAGTAGCTGCTGCTGCTTCTGTCGCAAGGGCGGCGGCAGCAGCTGCTAAGGTTGCATCAGATGCTGCATTGCAAGCTAAACTGATGGCTGATGAGGCTCTACGTTCAAGTCGAACTAGGCATCCTACTCAAACTATTGACACTTCTCTCTCTGATGGTGTGAAAAATATGGGAACAGTAACACCTGCATCAATTTTGATGGGTAAGGATAAGACCAACAGTTCAAGTTCAGTTATTGTTGCCGCAAAGGAGGCTGCTAGGAGAAGAGTTGAGGCTGCTTCTGCTGCCACAAAACGGGCAGAGAATCTGGATGCAGTAGTAAAAGCTGCAGAGCTGGCAGCTGAAGCTGTATCACAGGCAGGAACTATTATAGCAATGGGTGAACCTTTACCTCTAACACTGGGTGATTTAGTAGAGGCTGGTCCAAATGGTTATTGGAAAGTACAAGTCTCTTCAGAGCATATTGTCAAGTCAAGCAATTTAAATGAGGGGGGACATTCTAATGTAAATGGTATTGGTGAAGGTATTGAAAATTCTTCTGCTCATTTGAATGAGCAATCGTTGAATAAACAAGAAACTCAACAAGCTACTACAAGCCAGGAAAAGTCATCTTCAAAAGAGTTGGCCAGGCTTCCAGTGGAGAACAACGTGGGATTGGTGAATGGGGTGCAGAGCAGTGAAAAGGGATTGGGGAAGCAAAAAGGTCGTAAAACATCCAACTTGGGTAAGACTATAGGGGTTGTCCCAGAATCTGAGATTGGATCAAGAACTGATTCTGTCCCTGCCCAGAATGAGGAACATGAAGGAACTCAGTTAGCAGGATCTTCAAAAGAGAATAGCATTAAAGAAGGTTCAGTTGTAGAGGTTCTTGCTGACAAGGAGGGTTTTAGGAGAGTGTGGTTTTCAGCCAAGGTGCTGAGTTTAAAGGATGGAAAAGCTTACGTCTCTTACACTGAAGTTTTGCCAGATGAAGGCTTTGGGCAGCTAAAAGAGTGGGTACCACTTAAAGGTGAAGTTGATAAAGAACCAAGGCTACGGGTTCCTCATCCTACAACTGCAATGAAATTTGAAAAAACAAGAAAACGACGTAGAGCTGCCATTGGGGACTATTCTTGGTCTGTTGGAGATAGGGTAGATGCATGGAAACTTGATGGCTGGTGGGAAGGAATTATCTCAGAATGGAGCAAAGAGGATGAAATGTCTTTCATTGTTCATTTTCCAGCTCAAGGAGATACATCAGTTGTGAAAGCTTGGCATCTTCGGCCATCTCTTGTTTGGAAGGATGGGCAGTGGATTGAATGGTCCCGTTCTAGGGAAGATCAGCCCCGTTCTAATGAGGCTGATACTCCACAGGAGAAGCGACCAAAGTTGGGAAAACATGGGGCTGGAACAGATTCTGCAGTTGAGGTGAGTGGGAAGGACAAGGTTTCAAAAAATATGGGCGTCAGTGATTCAGGGAAACCTGAGGCGGCAAGGCTTCTAGCACTATCAGATAATGAAAAAATATTCACTGTTGGTAAAAGCATTAAAGAGGGAAGTAATTCTGATGCACTTACAACAAAGAGGATTGGTCTCCAGAAGGAAGGCTCAAGGGTTATTTTCGGCGTTCCTAAGCCTGGAAAGAAAAGGAAATTTATGGAAGTGAGCAAACATTATGTTTCAGATAAAAGTGCCCAGACAACTGAAGTAAGTGATTCAATGAAGTTCACAAAGTACCTGATACGTCAAGGATCAGGGCCCCGTGGATGGAAAAATACTAATAAAGTTGATTCAAAAGGAAAACGAGCAGCTGAATCTAAGCCTAAGGTGATTAAGTCAGGGAGAACTGGTAAAAATTCTTCTGAGAAAGATAGTTCTTCAATTTCTACTCTCTCTCTCTCAAATGATGGCCGTGTGCATGATCACGTCAAAACTTCTGTTGGCCATCATGAATCCATCCCAGAAAGGCAGAACCAGCTACAGCCTGGTTCGTTTCCTGACAACAACAAAGCAGCTGAGGGTACAACCTTATTTGCTTCTCTATCTCTTGCATCTGATGCTCCTTCATACAAGAAGAAGTCTTCGGCTACTGATTCTACCCTGGAGCTTAAAGGAAAAGTTGCTCCTTCTGCTGAAAAGTTGGCTAGAAATGATGAAAAAGATTCGGGTCACTATGATAATGCTGGAAAATCAGTTCCTGATGTCATTGAGCCCCGAAGATCCAATCGCAGGATTCAGCCAACATCAAGGCTATTAGAAGGGCTGCAAAGCTCCTATATTATCTCAAAGATTCCTGCTATCTCACATGACAAGAGTACCAGAGCTCAACATAGAGGCACTCAATCATCAAGGGGGAATAACCATAGCTGA 6690 43.9 MPLMASQTTIPTFVLACGRDAPMDYDDNDFQNQNFQLGAEENTKFPPGLRSYALPKFDLDDNLQVHLRFDSLVETEVLLGIQGQEENQWIEEFSRGNSGIEFSSGGAESCSISRRENVWSEAASSESVEMLLKSVGQDEMITGQTIIEGSDACDGLDNITNQMEPALNEDGSIPSNSGDAVDVGPTLPPKQCPESFAGLSKDVVAVQSQVEATPQSHKCEMSGYGSLKDLGPIMSGEKSDSPLAEGNLMIDEKCTDRNQREDGSLVVGSEENNPQDDSAVSETIQIDNLVPSIEELNATVTQQKPVEGSEQRTSFDNPDALQEDESVKEGEGDVSSKEDKLDDQNCDGNTVESTINKVENNSSSVKNIDFTVQLPVCSEHLCSEQTEQTEQTVQTSNWEAMVLSKSSEVGDKIVDDTHDSSLILEKEIDSLEGDAAKVNNSNVGIPSKPVLNMGPLAQAMEGQTQIASSEKQDHLLESDGYQLECGISGCNSETSLLKVEDKKLLEINSNNHVENPSFLMAEVCSSTNIIHEKQTTEERGDDYNSLGVQGDDCNSKDHVSVSLQADSSQICNSSLDIEPCKMENASMSTVSGGTESVDDGSLVMEKHVVSLSHGQSTAEAEVGVCEPKSSLVVGEESGNGIATNEVIQDKEDIMPSVCVGDVAQLEGKEESVTETFTESNLVMKECSLVPSEPASISEVENLAVCDGTGEQLPGSSGQSSSSAGTVSTTFQNEPEAVLPDKITQAYSCELETQLVVDDPVPKEDDSTGVIGVSNEKCKESSLNSTDVGCGCSVSSATDSLYHGPDAGSTIPDSEERNCGSPTVISSTEVPQNEKEKGKGGNGSLDQNSPVSDHMDGQGNKVEPCTDDIKGNSATEDDRSFTFEVSAQEVDLSDRETDRGWRPFPSVQHYEFHQTVEGSPSTSRLGPIDPKLQGTNRGSHRASDGETPRASSKGTSDHKRRRASGKGTDKEASKEGKSLKDPLRQAKDRGGSSCSVSPTSCGTVGQVVQGEEMRSSGYIEGSVTKPCGVLTAQPSTLPDLNTSASSSSFQQPFTDLQQVQLRAQIFVYGSLIQGTAPDEACMVAAFGESDGGRSLWDNVWRASLQRLHNQKHMHGNSETPLQSHPGSRFPEETSRQSSIQNKVIRTPTSRAGGKGAPSATINPVIPPSPLWSISTPSRDGMQPGSMPGSSLLDANQALSPLHHYQSPYVRHYVGNSSPWLSQAPAATPWVVSPAASVLDANALYSAFPITETGHVTTVREISVTHPSTMQHTPPSSLVHSGGSTSVPAGPPPLPEVKRAIVSPSKTASADPKPRKRKRSMASEESGHMSLVAQPQTESVSAVVVTNHLPTSVAITPSAAKTSTNSMLTNSPISATHFQIIGGQDMEQRVIFSEETCSKVEQAKQHAEDAAALAATAVGHSQSIWSQLAVQKISGLVSDVEAKLASAAVAVAAAASVARAAAAAAKVASDAALQAKLMADEALRSSRTRHPTQTIDTSLSDGVKNMGTVTPASILMGKDKTNSSSSVIVAAKEAARRRVEAASAATKRAENLDAVVKAAELAAEAVSQAGTIIAMGEPLPLTLGDLVEAGPNGYWKVQVSSEHIVKSSNLNEGGHSNVNGIGEGIENSSAHLNEQSLNKQETQQATTSQEKSSSKELARLPVENNVGLVNGVQSSEKGLGKQKGRKTSNLGKTIGVVPESEIGSRTDSVPAQNEEHEGTQLAGSSKENSIKEGSVVEVLADKEGFRRVWFSAKVLSLKDGKAYVSYTEVLPDEGFGQLKEWVPLKGEVDKEPRLRVPHPTTAMKFEKTRKRRRAAIGDYSWSVGDRVDAWKLDGWWEGIISEWSKEDEMSFIVHFPAQGDTSVVKAWHLRPSLVWKDGQWIEWSRSREDQPRSNEADTPQEKRPKLGKHGAGTDSAVEVSGKDKVSKNMGVSDSGKPEAARLLALSDNEKIFTVGKSIKEGSNSDALTTKRIGLQKEGSRVIFGVPKPGKKRKFMEVSKHYVSDKSAQTTEVSDSMKFTKYLIRQGSGPRGWKNTNKVDSKGKRAAESKPKVIKSGRTGKNSSEKDSSSISTLSLSNDGRVHDHVKTSVGHHESIPERQNQLQPGSFPDNNKAAEGTTLFASLSLASDAPSYKKKSSATDSTLELKGKVAPSAEKLARNDEKDSGHYDNAGKSVPDVIEPRRSNRRIQPTSRLLEGLQSSYIISKIPAISHDKSTRAQHRGTQSSRGNNHS 2229
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00640 2229 Coils Coil 1530 1550 - -
Nenu1g00640 2229 CDD Tudor-Agenet-AtDUF-rpt1-3 1728 1797 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 265 281 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 2204 2229 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 2149 2167 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 2092 2136 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 254 281 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 317 346 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 2060 2076 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 941 986 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 886 905 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 301 358 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1308 1322 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 2034 2059 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 913 1000 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1634 1726 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1265 1333 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 707 735 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1634 1657 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1113 1146 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 2077 2091 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1703 1726 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 2021 2189 - -
Nenu1g00640 2229 SMART agenet-At-2 1817 1875 IPR014002 -
Nenu1g00640 2229 SMART agenet-At-2 1726 1790 IPR014002 -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1109 1167 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 798 881 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1265 1282 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1883 1931 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 301 316 - -
Nenu1g00640 2229 CDD Tudor-Agenet-FMRP-like-rpt2 1821 1869 - -
Nenu1g00640 2229 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 23 2229 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 1883 1907 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 813 830 - -
Nenu1g00640 2229 Pfam Agenet domain 1731 1797 IPR008395 -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 711 734 - -
Nenu1g00640 2229 MobiDBLite consensus disorder prediction 913 928 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00640 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:17974691 Nenu6g01114 Nenu-Chr6:38049063 wgd