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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00648 ATGTATGGTTTAGATGCATTTTTCCAGGCATCCAAGACCAAGAAGAGTATAGAGATCTACTACTCAATCCAAGCTTCATCAATGGTGGATCTCCAGACTGTATGTTGCATGTGCGGCGACGTCGGTTTCTCCGACAAGCTCTTCCGTTGCACCAGATGCCAATATCGTTTTCAGCATTCGTACTGCAGTAACTACTACAGCGAACTGTCGGAGACTCCTGAGTTGTGCGACTGGTGCCAGAGTGAAGAGAGAAGTGCAAAGCATCGTGGTTCTAATTCGAAGAAGTTTGCTGGAAACGACTCCTCCGGAGCCCCCAACAGGTCTCAGTATTCCGGTGACAAGATCAAGCAACATGATCGGGATGACAGTTCCGACAAGGGGAGAGGCACGGGTAGCAATCCTTCCCCAAGACCAACTACACGCAGGTACAAGCTTCTCAAGGATGTAATGTGTTGA 456 48.68 MYGLDAFFQASKTKKSIEIYYSIQASSMVDLQTVCCMCGDVGFSDKLFRCTRCQYRFQHSYCSNYYSELSETPELCDWCQSEERSAKHRGSNSKKFAGNDSSGAPNRSQYSGDKIKQHDRDDSSDKGRGTGSNPSPRPTTRRYKLLKDVMC 151
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00648 151 MobiDBLite consensus disorder prediction 95 111 - -
Nenu1g00648 151 PANTHER EXPRESSED PROTEIN 28 151 - -
Nenu1g00648 151 MobiDBLite consensus disorder prediction 112 127 - -
Nenu1g00648 151 MobiDBLite consensus disorder prediction 84 144 - -
Nenu1g00648 151 SUPERFAMILY FYVE-PHD zinc finger 15 81 IPR011011 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00648 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr5:65517814 Nenu1g00648 Nenu-Chr1:18218278 transposed
Nenu Nenu-Chr1:18218278 Nenu6g01120 Nenu-Chr6:38282420 wgd