AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00657 ATGAAGAAAGGGAAGAAGGTGCTAGTGATATCAAATCCTCCTGCTGGTGGAGAAGGCTCAGATAAAAAGGGCGAATTATCTCTGCCCTTTGGCTCAAATCCTTCTTCCCGAAATGCTTCTTCTAAATACGATTTTGTCAAGGTAAAGGTATGGCTTGGCGATAATGCGGATCACTACTATGTTCTATCCAGATTTCTCCTCAGTAGAATGTTGACTGTCACTAAGATCCCTAATCATGTTGCTATTAAAATTGCTCTGGAACTCAAGAAGTTACTTATAGACAACAGTCTTCTGGATGTCTCCCAATCAGATTTGGAAGTTAATCTCTTTAAGCTTATGGAGAGGCGTGGATATGGGGAAGAATATATAAACCGTTATAAAATGATGACCAGATTTCATCACCAAAGAGTGCCATTGGTAATTCTTGTATGTGGAACTGCTTGTGTTGGGAAGTCAACAATTGCCACCCTGCTTGCACAAAGGCTAAACTTGCCAAATGTTTTACAGACTGCTATGGTATATGAATTGCTACGCACATCAACAGATGCTCCATTGGCATCTGTTCCTGTTTGGGCACAAGATTTTAGTTCTTCTAAGGAACTGATCACTGAATTTTGTAGAGAATGCAGAGTTGTTCGTAAAGGTTTGGCAGGTGATTTGAAGAAGGCAATGAAAGATGGCAAACCTATTATAATTGAGGGAATCCATTTGGATCCAAGTATTTATTTAATGGATGATGAGAATAAAGAACCAACAGATTTATTTGCAAAAAAAGAAGATCCAAAACCTTTGCCTATGACCAGTGAGGATGATATTGCAAAGGAAAAAGAATGCTGTGCAAGCAAGGCTCGTAGAGTTTCCAACCAGAGTAGTAGCATTCTACCTGCCAACCAGGTGAAAGAAGTTTCAGATAGTCTGGCATCTCTACATCTGGAAAGAAGTGCTTCTGAGAATCGAGGTGCAGATCTTAGAAGTCCAGAAACAAATTCTAGCCACCCTGTGAAGAAAGAAAAGCCACCTGCTAAACCACTAATTATACCTATAGTTCTGAATATGGCTGAATTTGATCACAAGGCATTACTAGAGGAATGGATCTCCACTAGGACATTTGGTGGTAAACGTCTACTCCAGGATCAGGATAAGCTCATAAGAAACTTGAAGATAATTCAAGATTATATTTGCTCGTTTGCATCTCAGGGTTTGACGGTGGTCAACATTTCGGCAACAACATTCCCACAAACACTTGATTGGCTGCATGGATATCTTCTTCAGTGTATTGAACGGGGTATTTCTTCTACATCTACTGAACCAACAACATGA 1320 39.85 MKKGKKVLVISNPPAGGEGSDKKGELSLPFGSNPSSRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVAIKIALELKKLLIDNSLLDVSQSDLEVNLFKLMERRGYGEEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTIATLLAQRLNLPNVLQTAMVYELLRTSTDAPLASVPVWAQDFSSSKELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDENKEPTDLFAKKEDPKPLPMTSEDDIAKEKECCASKARRVSNQSSSILPANQVKEVSDSLASLHLERSASENRGADLRSPETNSSHPVKKEKPPAKPLIIPIVLNMAEFDHKALLEEWISTRTFGGKRLLQDQDKLIRNLKIIQDYICSFASQGLTVVNISATTFPQTLDWLHGYLLQCIERGISSTSTEPTT 439
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00657 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 244 IPR027417 -
Nenu1g00657 439 MobiDBLite consensus disorder prediction 1 39 - -
Nenu1g00657 439 MobiDBLite consensus disorder prediction 313 339 - -
Nenu1g00657 439 Gene3D - 128 258 IPR027417 -
Nenu1g00657 439 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 34 429 - -
Nenu1g00657 439 MobiDBLite consensus disorder prediction 253 272 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00657 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:18377403 Nenu6g01130 Nenu-Chr6:38473590 wgd