Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nenu1g00658 | ATGACGTATTCAACAGGAAGAAACCCTAAACCATTCAAGAGGTCTTCGAACTGGACTGACCTCTGGTTCAAGTACAAAACTCTCAAGCATAAGCATGTTGTTTTCAAGATGCAGCTCCCATCTCTCAACGCAGCGGCAGCAGCAAAAAATGAGAAACATCCAGCGAAAAACCGAAGCTTAGGCTCTTCCAAGGATCTAACCTCTCTCTTATCCGACGAGCTTCTCCTTCGAATCTTCTCCAAGCTTCCTGACTCACAAAGAAACCCTAATTCGCTTGTATGCAAGCGATGGCTAGCTCTCCAGGGACGTCTTGTTCGCTCCGTTAAGCTCCTCGATTGGAGTTTCCTTGAATCTGGTCGCCTTGTTTCTCGTTTCCCTAATCTTACTGATATTGATCTTGTCACAGCTTGCATTTGTAGGCCCAGGAATTCTGGAATATTTCTATCCCACAAATTCATATCCTTTCATCTTGACTCTGGTTTCTCTCCCGGTGGGTTTATCCACGGGGAGAATTTACTGTCGCCAGAGGCAATTGATCGAGGGCTACGAGTTATTTCCCGCGGATGCCCTAATCTTCGGAAGCTTGCATTAATCAGTGCCACTGAAACGGGGTTGGAAAGCGTCGCTGAGGAGTGCCCGACTTTGCAAGAACTAGAGCTGCACCGGTGCACTGATCTCACGCTGCGTGGGATTGCCGCCTGCCAGAACCTTCAGATCTTGAATTTGATTGGAAGTGTCGATGGTTTTTACAATTCTGTGGTTTCGGATATTGGCCTTACTATCTTGGCACACGGGTGCAAGCGGCTTGTGAAACTTGAGCTGAGTGGGTGTGAAGGGAGCTACGACGGGATCAAAGCTATTGGGCAATGCTGCCACATGCTGGAGGAACTCACGCTGTGCGACCACAGGATGGATGCAGGGTGGATGGCTGCATTATCATTCTGTGGGAATCTGAAGACATTGAGGCTTAAGTCGTGCAAAAAGATTGATCCGAACCCCGGACCAGTTGAACATTTGGGGTCTTGCCCTACCCTTGAACGGTTGCATCTGCAGAATTGCCAAGTCCGGGATCAGCAGAGCATGAAATCATTGTTTATCGTATGCGAGGCTGTTAGAGAGATCATGTTTCAGAATTGTTGGGGCTTGGACAATGACATGTTCTCCTTTGCCAGCACTTGCAGGAGGGTAAAGTATCTATCTTTGGAAAGATGCTCGTTGCTGACAACAGATGGTCTGGAATCAGTGGTTCTTTCTTGGAAGGAGCTTCAAAGGCTTAGAGTGGTCTCATGTAACAATATAAAGGACAATGAAGTCACTCCTGCACTGTCAAGCTTGTTTTCTGTGCTCAAGGAGTTAAAATGGCGACCAGATTCCCGATCTCTTTTTTCAACCCTTTCAGCAACAGGAGTGGGAAAGAAAGGTGGTAAATTTTTCAAGAGGGTATGA | 1446 | 47.16 | MTYSTGRNPKPFKRSSNWTDLWFKYKTLKHKHVVFKMQLPSLNAAAAAKNEKHPAKNRSLGSSKDLTSLLSDELLLRIFSKLPDSQRNPNSLVCKRWLALQGRLVRSVKLLDWSFLESGRLVSRFPNLTDIDLVTACICRPRNSGIFLSHKFISFHLDSGFSPGGFIHGENLLSPEAIDRGLRVISRGCPNLRKLALISATETGLESVAEECPTLQELELHRCTDLTLRGIAACQNLQILNLIGSVDGFYNSVVSDIGLTILAHGCKRLVKLELSGCEGSYDGIKAIGQCCHMLEELTLCDHRMDAGWMAALSFCGNLKTLRLKSCKKIDPNPGPVEHLGSCPTLERLHLQNCQVRDQQSMKSLFIVCEAVREIMFQNCWGLDNDMFSFASTCRRVKYLSLERCSLLTTDGLESVVLSWKELQRLRVVSCNNIKDNEVTPALSSLFSVLKELKWRPDSRSLFSTLSATGVGKKGGKFFKRV | 481 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nenu1g00658 | 481 | Gene3D | Ribonuclease Inhibitor | 358 | 467 | IPR032675 | - | |
| Nenu1g00658 | 481 | SUPERFAMILY | F-box domain | 58 | 120 | IPR036047 | GO:0005515(InterPro) | |
| Nenu1g00658 | 481 | PANTHER | UNCHARACTERIZED | 68 | 452 | - | GO:0019005(PANTHER)|GO:0031146(PANTHER) | |
| Nenu1g00658 | 481 | FunFam | F-box protein At5g51380 | 63 | 330 | - | - | |
| Nenu1g00658 | 481 | SMART | LRR-CC-2 | 189 | 211 | IPR006553 | - | |
| Nenu1g00658 | 481 | SMART | LRR-CC-2 | 315 | 342 | IPR006553 | - | |
| Nenu1g00658 | 481 | SMART | LRR-CC-2 | 212 | 237 | IPR006553 | - | |
| Nenu1g00658 | 481 | SMART | LRR-CC-2 | 266 | 290 | IPR006553 | - | |
| Nenu1g00658 | 481 | SMART | LRR-CC-2 | 393 | 418 | IPR006553 | - | |
| Nenu1g00658 | 481 | CDD | F-box-AtTIR1-like | 68 | 103 | - | - | |
| Nenu1g00658 | 481 | Gene3D | - | 65 | 103 | - | - | |
| Nenu1g00658 | 481 | Gene3D | Ribonuclease Inhibitor | 120 | 355 | IPR032675 | - | |
| Nenu1g00658 | 481 | SUPERFAMILY | RNI-like | 110 | 244 | - | - | |
| Nenu1g00658 | 481 | SUPERFAMILY | RNI-like | 250 | 450 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nenu1g00658 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nenu | Nenu-Chr1:18485034 | Nenu6g01131 | Nenu-Chr6:38548403 | wgd |