AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00662 ATGGGTTCGTCCGCTACCCCGATTTCTCCAGCAAGGCTTCGTTCTGATCTGTATTCTTTCTCATATCAAGACGAATCAAACAGCCCCTTGGTGATTTCAGTTCTTGCCTCCCTCATCGAGAGAAGCATGGCTAGAAATGAAAGAACTTCGAGAAGAAGTAGTTGGATGCTGCCCAAAGATCCCCGAATTCGGGAGTTCTATTGCTATCAGGTACCAGACATGACCATTCAGTCGTTTCTCGAGAGAATCTTCCGTTATACGCGCGTTGGACCGCCGGTTTATGTCGTCGCCTATGCCTACATTGACCGCCTCTGCCAAATGCATCCTGAGTTTCGGATTACATCCAGCAATGTCTATAGGCTTCTAGTTACTACCATCATGGTCGCCTCTAAATTTGTGGAGGACATGAATTATAGGAACTCTTACTTCGCAAAGGTTGGTGGGCTAACAACCAAAGAGCTCAACAGACTAGAGGTTGATTTTCTGTTCTTGATGGGTTTCAAATTGCATGTAAACGTAAGTGTGTTCGAGAGCTACTGCTGTCATCTGGAGAGAGAAGTAAGCATAGGGGGAGGATACCACATTGAGAGGACTCTAAGGTTCATGTGTGCTGGTGAAATCAACTCCAAGCACAGAGATGAACATGACTTCAATAAGCTTGCACGCATCGTCGGATGTGGTTCACATTAG 690 45.94 MGSSATPISPARLRSDLYSFSYQDESNSPLVISVLASLIERSMARNERTSRRSSWMLPKDPRIREFYCYQVPDMTIQSFLERIFRYTRVGPPVYVVAYAYIDRLCQMHPEFRITSSNVYRLLVTTIMVASKFVEDMNYRNSYFAKVGGLTTKELNRLEVDFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRFMCAGEINSKHRDEHDFNKLARIVGCGSH 229
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00662 229 Gene3D - 21 215 - -
Nenu1g00662 229 PANTHER UNCHARACTERIZED 21 194 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nenu1g00662 229 PIRSF PREG 7 224 IPR012389 -
Nenu1g00662 229 Pfam Cyclin 32 169 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nenu1g00662 229 SUPERFAMILY Cyclin-like 76 170 IPR036915 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00662 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:18573939 Nenu6g01134 Nenu-Chr6:38661676 dispersed
Nenu Nenu-Chr1:18565321 Nenu1g00662 Nenu-Chr1:18573939 tandem