AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu1g00688 ATGGATGCACATACAGTAGCAAAGATTCAAGTATTAGGAAGCAACTATCAAAGTAGCCTTCTTGAAGTTGTTGACCCAAGTAATTTGCCAACTTTTCTGGGTGGAAATTGCACATGTTTAGAATATGGAGGTTGCATGTCAAGTGATAAAGGACCATGGAACAATACTGAAATTACTGAAGCATTGCAGGCAGTTTGTGATACAGAACTAAAGAATGAAAATAAAACAAATACAAGTATGGCTCTGGAAGAAACTCCACTGCCTGCTACAGGTGATGTTGAAATCAGTGCTACCCACAAGACGGACACACAGAAAGAAGGTTCAGAGCAACACACTGAGAGAGGATACTTGGACAATATTTTCCAGAAAATTCTGGCAATTGATGTTGCAGTGAAGGACGTCAAAATGGTCTTGGTTGGACTTACAGAGAAACAGGAAGAACTTGCAAAACAAGTAGAAGAACTGATGAATTTGGTCAGATCAATGACTCTCTGA 495 39.39 MDAHTVAKIQVLGSNYQSSLLEVVDPSNLPTFLGGNCTCLEYGGCMSSDKGPWNNTEITEALQAVCDTELKNENKTNTSMALEETPLPATGDVEISATHKTDTQKEGSEQHTERGYLDNIFQKILAIDVAVKDVKMVLVGLTEKQEELAKQVEELMNLVRSMTL 164
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu1g00688 164 SUPERFAMILY CRAL-TRIO domain 1 63 IPR036865 -
Nenu1g00688 164 Gene3D - 1 66 IPR036865 -
Nenu1g00688 164 Coils Coil 138 161 - -
Nenu1g00688 164 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 1 157 IPR051026 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu1g00688 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr1:19305705 Nenu3g01159 Nenu-Chr3:39081604 dispersed
Nenu Nenu-Chr1:19305705 Nenu1g03458 Nenu-Chr1:95525275 transposed